RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 ZNF677Q86XU0 584 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 CCDC71Q8IV32 467 aaPredicted RBP7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 DNAJC22Q8N4W6 341 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 PHC3Q8NDX5 983 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 GDAP1Q8TB36 358 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 CCHCR1Q8TD31 782 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 LCN9Q8WX39 176 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 ALPK1Q96QP1 1244 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 C17orf62Q9BQA9 187 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 GPATCH1Q9BRR8 931 aaKnown RBP7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 SRMSQ9H3Y6 488 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 CLSTN2Q9H4D0 955 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 IL26Q9NPH9 171 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 RBM22Q9NW64 420 aaKnown RBP eCLIP7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 SPHK1Q9NYA1 384 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 ACTR10Q9NZ32 417 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 DNPEPQ9ULA0 475 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 NPIPA1Q9UND3 350 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 RPL26L1Q9UNX3 145 aaKnown RBP7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 ZNF711Q9Y462 761 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 ASB1Q9Y576 335 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 SCN2AQ99250 2005 aa7.66□□□□□ -1.18
SLC46A1-201ENST00000578217 EIF3CLB5ME19 914 aaKnown RBP7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 E9PLN8 166 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 PRPSAP2O60256 369 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 PRAMEF1O95521 474 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 ONECUT2O95948 504 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 HPP00738 406 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 TPOP07202 933 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 HOXD4P09016 255 aaPredicted RBP7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 TPBGLP0DKB5 382 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 ITGAMP11215 1152 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 COX6A1P12074 109 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 UGT2B7P16662 529 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 VCLP18206 1134 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 ALAS2P22557 587 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 ADSLP30566 484 aaPredicted RBP7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 HOXC12P31275 282 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 PPP1R2P41236 205 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 EFNA3P52797 238 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 CACNG1Q06432 222 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 MYBPHQ13203 477 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 MAN2A1Q16706 1144 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 VWA3BQ502W6 1294 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 FNBP1LQ5T0N5 605 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 ATG9BQ674R7 924 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 PDPK2PQ6A1A2 396 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 HIBCHQ6NVY1 386 aaPredicted RBP7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 DCUN1D2Q6PH85 259 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 SPESP1Q6UW49 350 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 ARHGEF18Q6ZSZ5 1173 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 CEP128Q6ZU80 1094 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 TTLL10Q6ZVT0 673 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 PHC2Q8IXK0 858 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 MCOLN2Q8IZK6 566 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 BBS5Q8N3I7 341 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 CNTD1Q8N815 330 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 LMNTD1Q8N9Z9 388 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 THAP3Q8WTV1 239 aaPredicted RBP7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 PHF10Q8WUB8 498 aaKnown RBP7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 CPLX3Q8WVH0 158 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 FKBP10Q96AY3 582 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 NACC2Q96BF6 587 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 VPS35Q96QK1 796 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 OR2A14Q96R47 310 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 EIF3CQ99613 913 aaKnown RBP7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 VKORC1Q9BQB6 163 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 WDR54Q9H977 334 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 NLRC4Q9NPP4 1024 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 ENAMQ9NRM1 1142 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 TXLNGQ9NUQ3 528 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 KCNN3Q9UGI6 736 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 MRPS2Q9Y399 296 aaKnown RBP7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 AP1M2Q9Y6Q5 423 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 MAU2Q9Y6X3 613 aa7.65□□□□□ -1.18
SLC46A1-201ENST00000578217 TGP01266 2768 aa7.65□□□□□ -1.19
SLC46A1-201ENST00000578217 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.64□□□□□ -1.193e-9■■■□□ 14.6
SLC46A1-201ENST00000578217 MGAT4DA6NG13 374 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 TMEM191CA6NGB0 347 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 VSTM2BA6NLU5 285 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 ADARB2-AS1A8MUL3 147 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 INAFM1C9JVW0 142 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 H3BRJ5 948 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 FFAR3O14843 346 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 GPR42O15529 346 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 BUD23O43709 281 aaKnown RBP7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 ZWINTO95229 277 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 CD48P09326 243 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 EPB42P16452 691 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 PEBP1P30086 187 aaKnown RBP7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 SOX5P35711 763 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 POLR2FP61218 127 aaKnown RBP7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 KLC1Q07866 573 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 GALNT2Q10471 571 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 ZBTB17Q13105 803 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 PRKAA1Q13131 559 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 PRKG2Q13237 762 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 BECN1Q14457 450 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 PTPRCAPQ14761 206 aa7.64□□□□□ -1.19
SLC46A1-201ENST00000578217 PCOLCEQ15113 449 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms