RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ESX1Q8N693 406 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 IPMKQ8NFU5 416 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 BLOC1S5Q8TDH9 187 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 TFB1MQ8WVM0 346 aaKnown RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 KRT35Q92764 455 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 CXorf40BQ96DE9 158 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 PPM1MQ96MI6 270 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 VPS35Q96QK1 796 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 NRTNQ99748 197 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 FAM118BQ9BPY3 351 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 APOL2Q9BQE5 337 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 GORASP1Q9BQQ3 440 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ZPBPQ9BS86 351 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 TIMM29Q9BSF4 260 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 HEMGNQ9BXL5 484 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ULBP3Q9BZM4 244 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ADNPQ9H2P0 1102 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 EPB41L1Q9H4G0 881 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ZNF768Q9H5H4 540 aaKnown RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 UCK1Q9HA47 277 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 SLC40A1Q9NP59 571 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 DDX56Q9NY93 547 aaKnown RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 IL17CQ9P0M4 197 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 KLHL8Q9P2G9 620 aaPredicted RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 FAM153AQ9UHL3 310 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 LCMT1Q9UIC8 334 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 LNPEPQ9UIQ6 1025 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 KCTD3Q9Y597 815 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 NPFFR2Q9Y5X5 522 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ALG6Q9Y672 507 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 CFAP20Q9Y6A4 193 aaKnown RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 MYO18BQ8IUG5 2567 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 FLNBO75369 2602 aaKnown RBP6.07□□□□□ -1.44
NUP88-212ENST00000576708 hCG_1818297A0A087WSY0 165 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 IGHV5-51A0A0C4DH38 117 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 GLYATL1P3A0A0U1RQE8 302 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 NUDT19A8MXV4 375 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 GPR89AB7ZAQ6 455 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 CCL22O00626 93 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 SPAG6O75602 509 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 NDUFA10O95299 355 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 NTRK1P04629 796 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 TPM3P06753 285 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 EBLN1P0CF75 366 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 GPR89BP0CG08 455 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 FGF5P12034 268 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 FOLR1P15328 257 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 RBL1P28749 1068 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 HMGCLP35914 325 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 SPAM1P38567 509 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 SLC1A1P43005 524 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 MAGEA1P43355 309 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 CAPZBP47756 277 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 RPS18P62269 152 aaKnown RBP6.07□□□□□ -1.44
NUP88-212ENST00000576708 TBX2Q13207 712 aaPredicted RBP6.07□□□□□ -1.44
NUP88-212ENST00000576708 TRIM14Q14142 442 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 TFDP2Q14188 446 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 SLC1A5Q15758 541 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 C21orf62-AS1Q17RA5 79 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 FNBP1LQ5T0N5 605 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 GPRC6AQ5T6X5 926 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 AGAP9Q5VTM2 703 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 PWWP2BQ6NUJ5 590 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 FAM199XQ6PEV8 388 aaPredicted RBP6.07□□□□□ -1.44
NUP88-212ENST00000576708 WASH2PQ6VEQ5 465 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 AMZ2Q86W34 360 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 VSIG1Q86XK7 387 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 LILRA3Q8N6C8 439 aaPredicted RBP6.07□□□□□ -1.44
NUP88-212ENST00000576708 AVL9Q8NBF6 648 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 C9orf43Q8TAL5 461 aaPredicted RBP6.07□□□□□ -1.44
NUP88-212ENST00000576708 CT55Q8WUE5 264 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 APOBEC4Q8WW27 367 aaKnown RBP6.07□□□□□ -1.44
NUP88-212ENST00000576708 P3H4Q92791 437 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 TTC25Q96NG3 672 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 CATSPER2Q96P56 530 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 FCRL5Q96RD9 977 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 DIRC2Q96SL1 478 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 MAP3K3Q99759 626 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 FICDQ9BVA6 458 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 WWP1Q9H0M0 922 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 FAM96AQ9H5X1 160 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 WASH6PQ9NQA3 447 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 POT1Q9NUX5 634 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 IMP3Q9NV31 184 aaKnown RBP6.07□□□□□ -1.44
NUP88-212ENST00000576708 NDOR1Q9UHB4 597 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 RSPH14Q9UHP6 348 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 TP53TG5Q9Y2B4 290 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 ARL5AQ9Y689 179 aa6.07□□□□□ -1.44
NUP88-212ENST00000576708 PIPSLA2A3N6 862 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 C22orf46C9J442 243 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 AKR1B15C9JRZ8 316 aaPredicted RBP6.06□□□□□ -1.44
NUP88-212ENST00000576708 H7C0C1 242 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 STX7O15400 261 aaKnown RBP6.06□□□□□ -1.44
NUP88-212ENST00000576708 MTSS1O43312 755 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 PSTPIP1O43586 416 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 SGTAO43765 313 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 DNAJB5O75953 348 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 ZRANB2O95218 330 aaKnown RBP eCLIP6.06□□□□□ -1.44
NUP88-212ENST00000576708 EPOP01588 193 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 POLBP06746 335 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms