RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 EML5Q05BV3 1969 aa13.29□□□□□ -0.28
CCDC40-209ENST00000573474 NCOR1O75376 2440 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 A0A1B0GTW7 788 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 TRPC5OSA6NMA1 111 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 OR5K4A6NMS3 321 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 OR52A4PA6NMU1 304 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 TMEM233B4DJY2 109 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 HRO43593 1189 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 KDM1AO60341 852 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 EBLN1P0CF75 366 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 UROSP10746 265 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 ERGP11308 486 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 F3P13726 295 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 GNSP15586 552 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 CCND1P24385 295 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 AVPR2P30518 371 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 IDH3AP50213 366 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 ERVPABLB-1P60509 514 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 TCEA2Q15560 299 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 CYP2A13Q16696 494 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 KANK2Q63ZY3 851 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 DUS1LQ6P1R4 473 aaKnown RBP13.28□□□□□ -0.28
CCDC40-209ENST00000573474 EPGNQ6UW88 154 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 EFL1Q7Z2Z2 1120 aaKnown RBP13.28□□□□□ -0.28
CCDC40-209ENST00000573474 MAVSQ7Z434 540 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 LRRC56Q8IYG6 542 aaPredicted RBP13.28□□□□□ -0.28
CCDC40-209ENST00000573474 CHCHD4Q8N4Q1 142 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 OR52B6Q8NGF0 335 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 SETD7Q8WTS6 366 aaKnown RBP13.28□□□□□ -0.28
CCDC40-209ENST00000573474 STON2Q8WXE9 905 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 MED8Q96G25 268 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 SGPP1Q9BX95 441 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 NUSAP1Q9BXS6 441 aaKnown RBP13.28□□□□□ -0.28
CCDC40-209ENST00000573474 INTS7Q9NVH2 962 aaKnown RBP13.28□□□□□ -0.28
CCDC40-209ENST00000573474 ZSCAN32Q9NX65 697 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 SUSD2Q9UGT4 822 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 ZNF225Q9UK10 706 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 PLAGL1Q9UM63 463 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 FIS1Q9Y3D6 152 aa13.28□□□□□ -0.28
CCDC40-209ENST00000573474 ABCA7Q8IZY2 2146 aa13.27□□□□□ -0.28
CCDC40-209ENST00000573474 A0A1B0GTL3 188 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 E7ENX8 843 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 DIAPH2O60879 1101 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 GPR37L1O60883 481 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 OR4F21O95013 312 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 CLDN9O95484 217 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 EML2O95834 649 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 CHEK2O96017 543 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 ENO1P06733 434 aaKnown RBP13.27□□□□□ -0.29
CCDC40-209ENST00000573474 SLC2A4P14672 509 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 EPORP19235 508 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 PRDX3P30048 256 aaKnown RBP13.27□□□□□ -0.29
CCDC40-209ENST00000573474 ARL1P40616 181 aaPredicted RBP13.27□□□□□ -0.29
CCDC40-209ENST00000573474 TAP2Q03519 686 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 CDC16Q13042 620 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 TRAF3Q13114 568 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 ELOCQ15369 112 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 PDCD2Q16342 344 aaPredicted RBP13.27□□□□□ -0.29
CCDC40-209ENST00000573474 UGT3A2Q3SY77 523 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 PRRT3Q5FWE3 981 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 CLEC6AQ6EIG7 209 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 LETMD1Q6P1Q0 360 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 IYDQ6PHW0 289 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 CEP68Q76N32 757 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 PPFIBP2Q8ND30 876 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 OR4F6Q8NGB9 312 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 ZFPM2Q8WW38 1151 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 CXorf40BQ96DE9 158 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 ZC3H10Q96K80 434 aaKnown RBP13.27□□□□□ -0.29
CCDC40-209ENST00000573474 MAGEB10Q96LZ2 347 aaPredicted RBP13.27□□□□□ -0.29
CCDC40-209ENST00000573474 IL17FQ96PD4 163 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 MIPEPQ99797 713 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 LRRC61Q9BV99 259 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 RAB11FIP5Q9BXF6 653 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 NUF2Q9BZD4 464 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 KIR3DX1Q9H7L2 352 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 CCDC177Q9NQR7 707 aaPredicted RBP13.27□□□□□ -0.29
CCDC40-209ENST00000573474 GPRC5BQ9NZH0 403 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 ZNF624Q9P2J8 865 aaPredicted RBP13.27□□□□□ -0.29
CCDC40-209ENST00000573474 SPASTQ9UBP0 616 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 TRPS1Q9UHF7 1281 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 ZFC3H1O60293 1989 aaKnown RBP13.27□□□□□ -0.29
CCDC40-209ENST00000573474 ANKRD12Q6UB98 2062 aa13.27□□□□□ -0.29
CCDC40-209ENST00000573474 KIR2DS5A0A0G2JLQ3 304 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 A0A0G2JNG1 304 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 KIR2DS3K7RE56 304 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 EBAG9O00559 213 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 CLGNO14967 610 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 LRP4O75096 1905 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 DCTN3O75935 186 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 CELA2BP08218 269 aaPredicted RBP13.26□□□□□ -0.29
CCDC40-209ENST00000573474 SP9P0CG40 484 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 HGFP14210 728 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 XRCC1P18887 633 aaPredicted RBP13.26□□□□□ -0.29
CCDC40-209ENST00000573474 SLC19A1P41440 591 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 RAB28P51157 221 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 INHBCP55103 352 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 FOXA1P55317 472 aa13.26□□□□□ -0.29
CCDC40-209ENST00000573474 HNRNPKP61978 463 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC40-209ENST00000573474 TBPL1P62380 186 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms