RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	FAM151B	Q6UXP7	276 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	RIPOR1	Q6ZS17	1223 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	NLRP9	Q7RTR0	991 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	CAMKMT	Q7Z624	323 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	NT5DC3	Q86UY8	548 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	GHDC	Q8N2G8	530 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	DNAJC22	Q8N4W6	341 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	TSGA13	Q96PP4	275 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	TRIM7	Q9C029	511 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	KCNJ16	Q9NPI9	418 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737	EURL	Q9NYK6	297 aa		13.17	□□□□□ -0.3
SMG1-213	ENST00000567737		A0A0J9YY10	115 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	DSCR3	O14972	297 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	COX6A1	P12074	109 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	CHRNB4	P30926	498 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	HMGCL	P35914	325 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	KLK7	P49862	253 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	AP2B1	P63010	937 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	TFF3	Q07654	80 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	KLC1	Q07866	573 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	ATG9B	Q674R7	924 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	TXNRD3NB	Q6F5E7	133 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	CEP128	Q6ZU80	1094 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	ACRBP	Q8NEB7	543 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	WFDC11	Q8NEX6	87 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	LRRN4	Q8WUT4	740 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	MIEF2	Q96C03	454 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	OR2A14	Q96R47	310 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	HGH1	Q9BTY7	390 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	MVB12B	Q9H7P6	319 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	CUTC	Q9NTM9	273 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	ZNF358	Q9NW07	568 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	IL1RAPL1	Q9NZN1	696 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	SPO11	Q9Y5K1	396 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	NSD1	Q96L73	2696 aa	Predicted RBP	13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	RTTN	Q86VV8	2226 aa		13.16	□□□□□ -0.3
SMG1-213	ENST00000567737	GLYATL1P3	A0A0U1RQE8	302 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	FAM237B	A0A1B0GVD1	139 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	TMCO5B	A8MYB1	307 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	EPHB6	O15197	1021 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	ASNA1	O43681	348 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	TOX	O94900	526 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	CXCR2	P25025	360 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	PCSK6	P29122	969 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	OR1D4	P47884	311 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	OCA2	Q04671	838 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	PRKG2	Q13237	762 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	PAFAH1B3	Q15102	231 aa	Known RBP	13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	BCL7A	Q4VC05	210 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	NCBP2-AS2	Q69YL0	99 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	DAAM2	Q86T65	1068 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	PRSS58	Q8IYP2	241 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	CLYBL	Q8N0X4	340 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	CCNY	Q8ND76	341 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	PHC3	Q8NDX5	983 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	LILRB4	Q8NHJ6	448 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	HM13	Q8TCT9	377 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	LINC00615	Q96LM1	132 aa	Predicted RBP	13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	UCK2	Q9BZX2	261 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	RIC8B	Q9NVN3	520 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	SMOX	Q9NWM0	555 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	TAS2R14	Q9NYV8	317 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	TEKT2	Q9UIF3	430 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	C3orf18	Q9UK00	162 aa		13.15	□□□□□ -0.3
SMG1-213	ENST00000567737	ZNHIT1	O43257	154 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	CTAG2	O75638	210 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	CELA2A	P08217	269 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	TCF4	P15884	667 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	SHMT2	P34897	504 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	HSF1	Q00613	529 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	EEF1A2	Q05639	463 aa	Known RBP	13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	ZNF33B	Q06732	778 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	ATP13A4	Q4VNC1	1196 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	TMEM211	Q6ICI0	200 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	NAPRT	Q6XQN6	538 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	NEK10	Q6ZWH5	1172 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	METTL27	Q8N6F8	245 aa	Predicted RBP	13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	TTC29	Q8NA56	475 aa	Predicted RBP	13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	MLKL	Q8NB16	471 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	STT3B	Q8TCJ2	826 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	NAT14	Q8WUY8	206 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	MBD6	Q96DN6	1003 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	LRFN1	Q9P244	771 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	ICK	Q9UPZ9	632 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	MAU2	Q9Y6X3	613 aa		13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	FN1	P02751	2386 aa	Known RBP	13.14	□□□□□ -0.31
SMG1-213	ENST00000567737	IGHV1-45	A0A0A0MS14	117 aa		13.13	□□□□□ -0.31
SMG1-213	ENST00000567737	ASPDH	A6ND91	283 aa		13.13	□□□□□ -0.31
SMG1-213	ENST00000567737	RNF223	E7ERA6	249 aa		13.13	□□□□□ -0.31
SMG1-213	ENST00000567737	KCNK1	O00180	336 aa		13.13	□□□□□ -0.31
SMG1-213	ENST00000567737	NDST3	O95803	873 aa		13.13	□□□□□ -0.31
SMG1-213	ENST00000567737	CHRM5	P08912	532 aa	Predicted RBP	13.13	□□□□□ -0.31
SMG1-213	ENST00000567737	ZGLP1	P0C6A0	271 aa		13.13	□□□□□ -0.31
SMG1-213	ENST00000567737	ITGAM	P11215	1152 aa		13.13	□□□□□ -0.31
SMG1-213	ENST00000567737	MX2	P20592	715 aa		13.13	□□□□□ -0.31
SMG1-213	ENST00000567737	EEF1D	P29692	281 aa	Known RBP	13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms