RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 IMP3Q9NV31 184 aaKnown RBP10.79□□□□□ -0.68
SF3B3-205ENST00000564899 WWOXQ9NZC7 414 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 TBC1D29Q9UFV1 150 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 CFAP20Q9Y6A4 193 aaKnown RBP10.79□□□□□ -0.68
SF3B3-205ENST00000564899 KNL1Q8NG31 2342 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 GOLGA4Q13439 2230 aaKnown RBP10.78□□□□□ -0.68
SF3B3-205ENST00000564899 KRT87PA6NCN2 255 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 TMEM114B3SHH9 223 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 SHOX2O60902 331 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-205ENST00000564899 SIX3O95343 332 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-205ENST00000564899 CELA2BP08218 269 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-205ENST00000564899 VIMP08670 466 aaKnown RBP10.78□□□□□ -0.68
SF3B3-205ENST00000564899 FTH1P19P0C7X4 201 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 EEF1DP29692 281 aaKnown RBP10.78□□□□□ -0.68
SF3B3-205ENST00000564899 AGTR2P50052 363 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 NAGLUP54802 743 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 HERVK_113P63132 956 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 STX3Q13277 289 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 SETDB1Q15047 1291 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 ELOCQ15369 112 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 CCSMST1Q4G0I0 132 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 CFAP157Q5JU67 520 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 CDKL4Q5MAI5 379 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 ZNF678Q5SXM1 525 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 DUS1LQ6P1R4 473 aaKnown RBP10.78□□□□□ -0.68
SF3B3-205ENST00000564899 WASH2PQ6VEQ5 465 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 TAF8Q7Z7C8 310 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 SLCO6A1Q86UG4 719 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 DCUN1D3Q8IWE4 304 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 TCAIMQ8N3R3 496 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 FBXO15Q8NCQ5 510 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-205ENST00000564899 OR5AR1Q8NGP9 310 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 OR6Y1Q8NGX8 325 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 MAGEC3Q8TD91 643 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 RHBDF1Q96CC6 855 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 L3HYPDHQ96EM0 354 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 CHMP6Q96FZ7 201 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 PKP4Q99569 1192 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 LRRC61Q9BV99 259 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 ERVK-6Q9BXR3 956 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 TRIT1Q9H3H1 467 aaKnown RBP10.78□□□□□ -0.68
SF3B3-205ENST00000564899 WASH6PQ9NQA3 447 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 ACSS2Q9NR19 701 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 TAAR2Q9P1P5 351 aa10.78□□□□□ -0.68
SF3B3-205ENST00000564899 A6NCN8 305 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 LRRC14BA6NHZ5 514 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 OR52A4PA6NMU1 304 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 MYO1CO00159 1063 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 TAPBPO15533 448 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 NPHS1O60500 1241 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 C1QL1O75973 258 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 SUPT7LO94864 414 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 EML2O95834 649 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 RPS17P08708 135 aaKnown RBP10.77□□□□□ -0.69
SF3B3-205ENST00000564899 MTHFD1P11586 935 aaKnown RBP10.77□□□□□ -0.69
SF3B3-205ENST00000564899 IMPDH1P20839 514 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 DPP6P42658 865 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 CTSKP43235 329 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 HNMTP50135 292 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 ABCE1P61221 599 aaKnown RBP10.77□□□□□ -0.69
SF3B3-205ENST00000564899 HNRNPKP61978 463 aaKnown RBP eCLIP10.77□□□□□ -0.69
SF3B3-205ENST00000564899 C1orf61Q13536 156 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 RCN2Q14257 317 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 KRT33BQ14525 404 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 CLCA4Q14CN2 919 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 RPE65Q16518 533 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 KIF19Q2TAC6 998 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 C18orf21Q32NC0 220 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-205ENST00000564899 UNC50Q53HI1 259 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 FBXO48Q5FWF7 155 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 PRAMEF14Q5SWL7 426 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 CES4AQ5XG92 561 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 ANKS6Q68DC2 871 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 ABRAXAS1Q6UWZ7 409 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 FAM47EQ6ZV65 393 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 TBC1D21Q8IYX1 336 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 LRRC34Q8IZ02 419 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 PHC3Q8NDX5 983 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 OR9A1PQ8NGU1 263 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 OR5K2Q8NHB8 316 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 LMX1AQ8TE12 382 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 PPP4R1Q8TF05 950 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 UBTD2Q8WUN7 234 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 ATL1Q8WXF7 558 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 ESAMQ96AP7 390 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 RAD51AP1Q96B01 352 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 FBXL8Q96CD0 374 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 CCDC138Q96M89 665 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 FERD3LQ96RJ6 166 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 TMEM79Q9BSE2 394 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 HGH1Q9BTY7 390 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 MVB12BQ9H7P6 319 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 ERVMER34-1Q9H9K5 563 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 SLCO1B3Q9NPD5 702 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 THAP1Q9NVV9 213 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 SCHIP1Q9P0W5 487 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-205ENST00000564899 SPASTQ9UBP0 616 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 CIDEBQ9UHD4 219 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 PTBP2Q9UKA9 531 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms