RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TRIM42Q8IWZ5 723 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 SFRP1Q8N474 314 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 PTGR2Q8N8N7 351 aaPredicted RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 PHC3Q8NDX5 983 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 OR5AR1Q8NGP9 310 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 OR9A1PQ8NGU1 263 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 ZDHHC1Q8WTX9 485 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 ZFPM2Q8WW38 1151 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 DYDC1Q8WWB3 177 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 CKAP2Q8WWK9 683 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 ATL1Q8WXF7 558 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 RHBDF1Q96CC6 855 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 CXorf40BQ96DE9 158 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 PKP4Q99569 1192 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 EGFL8Q99944 293 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 MECRQ9BV79 373 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 GAREM1Q9H706 876 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 POT1Q9NUX5 634 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 UCKL1Q9NWZ5 548 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 NCKIPSDQ9NZQ3 722 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 ZNF624Q9P2J8 865 aaPredicted RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 PTBP2Q9UKA9 531 aaKnown RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 ZMIZ1Q9ULJ6 1067 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 TNPO3Q9Y5L0 923 aaKnown RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 CFAP20Q9Y6A4 193 aaKnown RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 LAMA5O15230 3695 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 WDR91A4D1P6 747 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 NCF1BA6NI72 391 aaPredicted RBP12.54□□□□□ -0.4
SPG7-209ENST00000564047 NCF1CA8MVU1 366 aaPredicted RBP12.54□□□□□ -0.4
SPG7-209ENST00000564047 KDM1AO60341 852 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 NCF1P14598 390 aaPredicted RBP12.54□□□□□ -0.4
SPG7-209ENST00000564047 IMPDH1P20839 514 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 GGT5P36269 586 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 HSD17B2P37059 387 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 SLC19A1P41440 591 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 GRB7Q14451 532 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 PDK4Q16654 411 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 METTL2BQ6P1Q9 378 aaKnown RBP12.54□□□□□ -0.4
SPG7-209ENST00000564047 DUS1LQ6P1R4 473 aaKnown RBP12.54□□□□□ -0.4
SPG7-209ENST00000564047 KANSL1Q7Z3B3 1105 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 SLC9B2Q86UD5 537 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 TAX1BP1Q86VP1 789 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 NAGSQ8N159 534 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 SLC25A45Q8N413 288 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 AVL9Q8NBF6 648 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 OR6Y1Q8NGX8 325 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 RAB3IL1Q8TBN0 382 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 FBXL8Q96CD0 374 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 PHF21BQ96EK2 531 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 L3HYPDHQ96EM0 354 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 CAMK1GQ96NX5 476 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 ACTR5Q9H9F9 607 aaPredicted RBP12.54□□□□□ -0.4
SPG7-209ENST00000564047 FSCN3Q9NQT6 498 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 SPATA7Q9P0W8 599 aa12.54□□□□□ -0.4
SPG7-209ENST00000564047 GCN1Q92616 2671 aaKnown RBP12.54□□□□□ -0.4
SPG7-209ENST00000564047 SMG1Q96Q15 3661 aaKnown RBP12.53□□□□□ -0.4
SPG7-209ENST00000564047 B4DGG1 531 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 TAPBPO15533 448 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 H2AFYO75367 372 aaKnown RBP12.53□□□□□ -0.4
SPG7-209ENST00000564047 GIMD1P0DJR0 217 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 FGF3P11487 239 aaPredicted RBP12.53□□□□□ -0.4
SPG7-209ENST00000564047 NEFHP12036 1026 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 ENGP17813 658 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 IMPA1P29218 277 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 CCT8P50990 548 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 NAA20P61599 178 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 HERVK_113P63132 956 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 UBE2IP63279 158 aaKnown RBP12.53□□□□□ -0.4
SPG7-209ENST00000564047 PRKG2Q13237 762 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 ARHGAP19Q14CB8 494 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 PCBP2Q15366 365 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPG7-209ENST00000564047 CHI3L2Q15782 390 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 DEFB133Q30KQ1 61 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 UNQ6494/PRO21346Q6UXR6 183 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 MBOAT1Q6ZNC8 495 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 C17orf82Q86X59 251 aaPredicted RBP12.53□□□□□ -0.4
SPG7-209ENST00000564047 TRIM48Q8IWZ4 208 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 RBM12BQ8IXT5 1001 aaKnown RBP12.53□□□□□ -0.4
SPG7-209ENST00000564047 KLHDC8AQ8IYD2 350 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 LRRC34Q8IZ02 419 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 RAB42Q8N4Z0 105 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 ANKS4BQ8N8V4 417 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 CCDC197Q8NCU1 140 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 MAPK15Q8TD08 544 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 SLC37A2Q8TED4 501 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 SAP25Q8TEE9 199 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 UBTD2Q8WUN7 234 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 MAGEB18Q96M61 343 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 TMEM237Q96Q45 408 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 PLCD4Q9BRC7 762 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 HGH1Q9BTY7 390 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 RAB11FIP5Q9BXF6 653 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 C1QTNF3Q9BXJ4 246 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 ERVK-6Q9BXR3 956 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 RASSF4Q9H2L5 321 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 KIR3DX1Q9H7L2 352 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 IL21RQ9HBE5 538 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 SLC40A1Q9NP59 571 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 WWOXQ9NZC7 414 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 STOX2Q9P2F5 926 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms