RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SYVN1Q86TM6 617 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 THOC6Q86W42 341 aaKnown RBP10.01□□□□□ -0.81
USP3-219ENST00000561326 SLC22A18ASQ8N1D0 253 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 DTWD2Q8NBA8 298 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 OR5AR1Q8NGP9 310 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 OR56A3Q8NH54 315 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 CEP70Q8NHQ1 597 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 METTL6Q8TCB7 284 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 GPBAR1Q8TDU6 330 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 ZFPM2Q8WW38 1151 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 GAB3Q8WWW8 586 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 SH3KBP1Q96B97 665 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 CXorf40BQ96DE9 158 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 MED8Q96G25 268 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 CAMK1GQ96NX5 476 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 INSM2Q96T92 566 aaPredicted RBP10.01□□□□□ -0.81
USP3-219ENST00000561326 MIPEPQ99797 713 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 CCDC28BQ9BUN5 200 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 PCBD2Q9H0N5 130 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 ACTR8Q9H981 624 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 ZBTB26Q9HCK0 441 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 PRDM8Q9NQV8 689 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 IMP3Q9NV31 184 aaKnown RBP10.01□□□□□ -0.81
USP3-219ENST00000561326 SPATA7Q9P0W8 599 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 SLC22A14Q9Y267 594 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 FIS1Q9Y3D6 152 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 DYRK1BQ9Y463 629 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 CACNA1EQ15878 2313 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 CABIN1Q9Y6J0 2220 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 A0A1W2PR77 199 aa10□□□□□ -0.81
USP3-219ENST00000561326 PPP6CO00743 305 aa10□□□□□ -0.81
USP3-219ENST00000561326 ZNF195O14628 629 aa10□□□□□ -0.81
USP3-219ENST00000561326 SCAMP1O15126 338 aa10□□□□□ -0.81
USP3-219ENST00000561326 UGDHO60701 494 aa10□□□□□ -0.81
USP3-219ENST00000561326 KIAA0754O94854 1291 aa10□□□□□ -0.81
USP3-219ENST00000561326 OR4F21O95013 312 aa10□□□□□ -0.81
USP3-219ENST00000561326 KRT6AP02538 564 aa10□□□□□ -0.81
USP3-219ENST00000561326 CSF2P04141 144 aa10□□□□□ -0.81
USP3-219ENST00000561326 KRT6BP04259 564 aa10□□□□□ -0.81
USP3-219ENST00000561326 MTHFD1P11586 935 aaKnown RBP10□□□□□ -0.81
USP3-219ENST00000561326 F3P13726 295 aa10□□□□□ -0.81
USP3-219ENST00000561326 GNAZP19086 355 aa10□□□□□ -0.81
USP3-219ENST00000561326 AK4P27144 223 aaPredicted RBP10□□□□□ -0.81
USP3-219ENST00000561326 IMPA1P29218 277 aa10□□□□□ -0.81
USP3-219ENST00000561326 KRT6CP48668 564 aa10□□□□□ -0.81
USP3-219ENST00000561326 DHPSP49366 369 aaPredicted RBP10□□□□□ -0.81
USP3-219ENST00000561326 HNRNPKP61978 463 aaKnown RBP eCLIP10□□□□□ -0.81
USP3-219ENST00000561326 DMWDQ09019 674 aa10□□□□□ -0.81
USP3-219ENST00000561326 CLCA4Q14CN2 919 aa10□□□□□ -0.81
USP3-219ENST00000561326 ELOCQ15369 112 aa10□□□□□ -0.81
USP3-219ENST00000561326 PDCD2Q16342 344 aaPredicted RBP10□□□□□ -0.81
USP3-219ENST00000561326 RPE65Q16518 533 aa10□□□□□ -0.81
USP3-219ENST00000561326 CCSMST1Q4G0I0 132 aa10□□□□□ -0.81
USP3-219ENST00000561326 THEMIS2Q5TEJ8 643 aa10□□□□□ -0.81
USP3-219ENST00000561326 LIPJQ5W064 366 aa10□□□□□ -0.81
USP3-219ENST00000561326 LYSMD4Q5XG99 296 aa10□□□□□ -0.81
USP3-219ENST00000561326 KANK2Q63ZY3 851 aa10□□□□□ -0.81
USP3-219ENST00000561326 NXNQ6DKJ4 435 aa10□□□□□ -0.81
USP3-219ENST00000561326 CLEC6AQ6EIG7 209 aa10□□□□□ -0.81
USP3-219ENST00000561326 C6orf89Q6UWU4 347 aa10□□□□□ -0.81
USP3-219ENST00000561326 CCDC121Q6ZUS5 278 aa10□□□□□ -0.81
USP3-219ENST00000561326 TAF8Q7Z7C8 310 aa10□□□□□ -0.81
USP3-219ENST00000561326 TRIM48Q8IWZ4 208 aa10□□□□□ -0.81
USP3-219ENST00000561326 DDIASQ8IXT1 998 aa10□□□□□ -0.81
USP3-219ENST00000561326 PHACTR4Q8IZ21 702 aa10□□□□□ -0.81
USP3-219ENST00000561326 AVL9Q8NBF6 648 aa10□□□□□ -0.81
USP3-219ENST00000561326 OR4F6Q8NGB9 312 aa10□□□□□ -0.81
USP3-219ENST00000561326 ZNF480Q8WV37 535 aa10□□□□□ -0.81
USP3-219ENST00000561326 SMPDL3AQ92484 453 aa10□□□□□ -0.81
USP3-219ENST00000561326 PYCR2Q96C36 320 aa10□□□□□ -0.81
USP3-219ENST00000561326 HAUS8Q9BT25 410 aa10□□□□□ -0.81
USP3-219ENST00000561326 TUBB6Q9BUF5 446 aa10□□□□□ -0.81
USP3-219ENST00000561326 SLC29A3Q9BZD2 475 aa10□□□□□ -0.81
USP3-219ENST00000561326 NUF2Q9BZD4 464 aa10□□□□□ -0.81
USP3-219ENST00000561326 MEAF6Q9HAF1 191 aa10□□□□□ -0.81
USP3-219ENST00000561326 TCF7L2Q9NQB0 619 aa10□□□□□ -0.81
USP3-219ENST00000561326 CCDC177Q9NQR7 707 aaPredicted RBP10□□□□□ -0.81
USP3-219ENST00000561326 INTS7Q9NVH2 962 aaKnown RBP10□□□□□ -0.81
USP3-219ENST00000561326 GPRC5BQ9NZH0 403 aa10□□□□□ -0.81
USP3-219ENST00000561326 TBC1D29Q9UFV1 150 aa10□□□□□ -0.81
USP3-219ENST00000561326 SUSD2Q9UGT4 822 aa10□□□□□ -0.81
USP3-219ENST00000561326 APOBEC3BQ9UH17 382 aaKnown RBP10□□□□□ -0.81
USP3-219ENST00000561326 TRPS1Q9UHF7 1281 aa10□□□□□ -0.81
USP3-219ENST00000561326 SNX6Q9UNH7 406 aa10□□□□□ -0.81
USP3-219ENST00000561326 DOLKQ9UPQ8 538 aa10□□□□□ -0.81
USP3-219ENST00000561326 WDR37Q9Y2I8 494 aa10□□□□□ -0.81
USP3-219ENST00000561326 ASB1Q9Y576 335 aa10□□□□□ -0.81
USP3-219ENST00000561326 CFAP20Q9Y6A4 193 aaKnown RBP10□□□□□ -0.81
USP3-219ENST00000561326 RALGAPA1Q6GYQ0 2036 aa10□□□□□ -0.81
USP3-219ENST00000561326 TNRC6BQ9UPQ9 1833 aaKnown RBP10□□□□□ -0.81
USP3-219ENST00000561326 TMEM131Q92545 1883 aa10□□□□□ -0.81
USP3-219ENST00000561326 MDC1Q14676 2089 aaKnown RBP9.99□□□□□ -0.81
USP3-219ENST00000561326 KIR2DS5A0A0G2JLQ3 304 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 A0A0G2JNG1 304 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 GOLGA8QA0A0J9YX86 632 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 A0A1B0GTW7 788 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 GOLGA8OA6NCC3 632 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 ERICH4A6NGS2 130 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 TMEM233B4DJY2 109 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 GOLGA8NF8WBI6 632 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms