RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	TLE3	Q04726	772 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	PTK2B	Q14289	1009 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	PTPRR	Q15256	657 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	ISX	Q2M1V0	245 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	ALG11	Q2TAA5	492 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	CD300E	Q496F6	205 aa	Predicted RBP	7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	C3orf38	Q5JPI3	329 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	ERMARD	Q5T6L9	678 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	TXNRD3NB	Q6F5E7	133 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	ENPP7	Q6UWV6	458 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	MACC1	Q6ZN28	852 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	RFX8	Q6ZV50	586 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	SFTPA2	Q8IWL1	248 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	PELI3	Q8N2H9	469 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	PAF1	Q8N7H5	531 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	ARHGEF26	Q96DR7	871 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	VCPIP1	Q96JH7	1222 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	APOO	Q9BUR5	198 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	POLR1B	Q9H9Y6	1135 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	ETNK2	Q9NVF9	386 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	CWC15	Q9P013	229 aa	Known RBP	7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	CNOT8	Q9UFF9	292 aa	Known RBP	7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	PIEZO2	Q9H5I5	2752 aa		7.03	□□□□□ -1.28
MARK3-223	ENST00000561071	ZNF462	Q96JM2	2506 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	SETX	Q7Z333	2677 aa	Known RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071		A0A0U1RQS6	177 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	TSPAN11	A1L157	253 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	EME2	A4GXA9	379 aa	Predicted RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	TMEM202	A6NGA9	273 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ARHGAP42	A6NI28	874 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	BTN3A1	O00481	513 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	TOR1B	O14657	336 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	FRS3	O43559	492 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	PRPSAP2	O60256	369 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	LRCH4	O75427	683 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	RNF8	O76064	485 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	RECQL5	O94762	991 aa	Predicted RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	MBD3	O95983	291 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	GRP	P07492	148 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	CCDC172	P0C7W6	258 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	BRAF	P15056	766 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	GM2A	P17900	193 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	IL1R2	P27930	398 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	MMP12	P39900	470 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	AIF1	P55008	147 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	UCP3	P55916	312 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	SRP54	P61011	504 aa	Known RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	KLHL30	Q0D2K2	578 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	SLC10A7	Q0GE19	358 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ELP6	Q0PNE2	266 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	RALGDS	Q12967	914 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	HLTF	Q14527	1009 aa	Known RBP eCLIP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	KIF26B	Q2KJY2	2108 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	SMTNL2	Q2TAL5	461 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	CFAP58	Q5T655	872 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	CAVIN1	Q6NZI2	390 aa	Known RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ERAP2	Q6P179	960 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	CRIP3	Q6Q6R5	217 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	TMPRSS9	Q7Z410	1059 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ZSCAN30	Q86W11	494 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071		Q8N9G6	341 aa	Predicted RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	PSD4	Q8NDX1	1056 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	POC1B	Q8TC44	478 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	PROKR1	Q8TCW9	393 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	OR1E3	Q8WZA6	343 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	MAML1	Q92585	1016 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	TMEM125	Q96AQ2	219 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ZNF653	Q96CK0	615 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	APIP	Q96GX9	242 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	BOD1	Q96IK1	185 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	HIC2	Q96JB3	615 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ZNF641	Q96N77	438 aa	Predicted RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	SMIM14	Q96QK8	99 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	LGMN	Q99538	433 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	CCDC3	Q9BQI4	270 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	CINP	Q9BW66	212 aa	Predicted RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	C1QTNF7	Q9BXJ2	289 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	NAT10	Q9H0A0	1025 aa	Known RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	SUDS3	Q9H7L9	328 aa	Predicted RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ZWILCH	Q9H900	591 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	UNKL	Q9H9P5	680 aa	Known RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	USP29	Q9HBJ7	922 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ARNT2	Q9HBZ2	717 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	CPNE5	Q9HCH3	593 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	GALNT9	Q9HCQ5	603 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ASCL3	Q9NQ33	180 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	MRPL40	Q9NQ50	206 aa	Known RBP	7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	AIPL1	Q9NZN9	384 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	PADI4	Q9UM07	663 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	MYO6	Q9UM54	1294 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	SATB2	Q9UPW6	733 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	PLEKHM1	Q9Y4G2	1056 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	ENTPD2	Q9Y5L3	495 aa		7.02	□□□□□ -1.29
MARK3-223	ENST00000561071	LRRK1	Q38SD2	2015 aa		7.01	□□□□□ -1.29
MARK3-223	ENST00000561071	SHROOM3	Q8TF72	1996 aa		7.01	□□□□□ -1.29
MARK3-223	ENST00000561071	PRAMEF33	A0A0G2JMD5	474 aa		7.01	□□□□□ -1.29
MARK3-223	ENST00000561071		A0A1W2PS29	197 aa		7.01	□□□□□ -1.29
MARK3-223	ENST00000561071	EIF4E1B	A6NMX2	242 aa	Known RBP	7.01	□□□□□ -1.29
MARK3-223	ENST00000561071	SMTNL1	A8MU46	457 aa		7.01	□□□□□ -1.29

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