RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 OR52E1Q8NGJ3 308 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 UBLCP1Q8WVY7 318 aaPredicted RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 PIGTQ969N2 578 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 THOC1Q96FV9 657 aaKnown RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 C16orf45Q96MC5 204 aaPredicted RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 GDAP1L1Q96MZ0 367 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 FAM111AQ96PZ2 611 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ZNF559Q9BR84 538 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ATG101Q9BSB4 218 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 BTBD10Q9BSF8 475 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 PRRG4Q9BZD6 226 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 SEMA4CQ9C0C4 833 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 HSD3B7Q9H2F3 369 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 TSPY26PQ9H489 355 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 SYTL2Q9HCH5 934 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 SERINC1Q9NRX5 453 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 TRNAU1APQ9NX07 287 aaKnown RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 HMG20BQ9P0W2 317 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 TXNDC16Q9P2K2 825 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 B3GAT1Q9P2W7 334 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 SH3BGRL2Q9UJC5 107 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 FZD10Q9ULW2 581 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 KCNK6Q9Y257 313 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 AMDHD2Q9Y303 409 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 STRAPQ9Y3F4 350 aaKnown RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 TMED3Q9Y3Q3 217 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ATP6V0A2Q9Y487 856 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 YIPF1Q9Y548 306 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 INSL5Q9Y5Q6 135 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 DMRT1Q9Y5R6 373 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 HS3ST3B1Q9Y662 390 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 PCDH11YQ9BZA8 1340 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 SYNRGQ9UMZ2 1314 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 IGLV5-39A0A0G2JS06 123 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 RPS10-NUDT3A0A1W2PQS6 291 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 LINC01553A4QN01 128 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 H0YIG0 161 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 CACNB4O00305 520 aaPredicted RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 DVL1O14640 695 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 ATP9AO75110 1047 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 RFPL2O75678 378 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 LETM1O95202 739 aaPredicted RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 GHRP10912 638 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 MYOD1P15172 320 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 POLR2CP19387 275 aaPredicted RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 TNFRSF1BP20333 461 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 JAK1P23458 1154 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 PIK3R1P27986 724 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 TMPOP42166 694 aaKnown RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 AMTP48728 403 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 PLCD1P51178 756 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 MMP15P51511 669 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 SMSP52788 366 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 INHBCP55103 352 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 ISL1P61371 349 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 HTD2P86397 168 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 MAT1AQ00266 395 aaKnown RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 COL10A1Q03692 680 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 KLHL30Q0D2K2 578 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 RBMS2Q15434 407 aaKnown RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 OASLQ15646 514 aaKnown RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 FAM46CQ5VWP2 391 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 MFSD7Q6UXD7 560 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 C1orf186Q6ZWK4 172 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 MIER3Q7Z3K6 550 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 RD3Q7Z3Z2 195 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 PRSS42Q7Z5A4 293 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 TMPRSS12Q86WS5 348 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 Q8N1X5 172 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 RYBPQ8N488 228 aaPredicted RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 AMER3Q8N944 861 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 THAP8Q8NA92 274 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 OR14A16Q8NHC5 309 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 MPLKIPQ8TAP9 179 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 PHF21AQ96BD5 680 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 COQ8BQ96D53 544 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 EEF2KMTQ96G04 330 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 OXNAD1Q96HP4 312 aaPredicted RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 CDKN2AIPNLQ96HQ2 116 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 C3orf30Q96M34 536 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 ZNF560Q96MR9 790 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 IWS1Q96ST2 819 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 ANP32EQ9BTT0 268 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 S1PR5Q9H228 398 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 EBF3Q9H4W6 596 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 PCDH9Q9HC56 1237 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 ACKR4Q9NPB9 350 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 GKN1Q9NS71 199 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 ZBTB40Q9NUA8 1239 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 TAS2R3Q9NYW6 316 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 LRWD1Q9UFC0 647 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 TRMT6Q9UJA5 497 aaKnown RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 AGO1Q9UL18 857 aaKnown RBP2.98□□□□□ -1.93
TRAV28-201ENST00000557548 WDR83OSQ9Y284 106 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 JRKLQ9Y4A0 524 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 PTGDR2Q9Y5Y4 395 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 AP1M2Q9Y6Q5 423 aa2.98□□□□□ -1.93
TRAV28-201ENST00000557548 ATP8B3O60423 1300 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 MED19A0JLT2 244 aaPredicted RBP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 ILVBLA1L0T0 632 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms