RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 KIF5AQ12840 1032 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 ITGA9Q13797 1035 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 CNN3Q15417 329 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 INSCQ1MX18 579 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 MUM1Q2TAK8 710 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 ANKRD20A2Q5SQ80 823 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 LDLRAP1Q5SW96 308 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 CATSPEREQ5SY80 951 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 ZNF648Q5T619 568 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 ANKRD20A1Q5TYW2 823 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 AGAP9Q5VTM2 703 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 ANKRD20A3Q5VUR7 823 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 RANBP10Q6VN20 620 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 GLT6D1Q7Z4J2 308 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 KIAA1328Q86T90 577 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 DTX1Q86Y01 620 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 CDKL3Q8IVW4 592 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 SYCE1Q8N0S2 351 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 SLC25A41Q8N5S1 370 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 OR2C3Q8N628 320 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 LRRC57Q8N9N7 239 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 IPMKQ8NFU5 416 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 UHMK1Q8TAS1 419 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 BLOC1S5Q8TDH9 187 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 LRRC45Q96CN5 670 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 TTC25Q96NG3 672 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 C19orf43Q9BQ61 176 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 DDA1Q9BW61 102 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 FSD1LQ9BXM9 530 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 GBA3Q9H227 469 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 ARFGAP3Q9NP61 516 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 PRDM8Q9NQV8 689 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 SLC23A2Q9UGH3 650 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 AMFRQ9UKV5 643 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 TMPRSS11EQ9UL52 423 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 PKP3Q9Y446 797 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 CACNA1GO43497 2377 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 GLYATL1P3A0A0U1RQE8 302 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 GRID2IPA4D2P6 1211 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 GOLGA6L9A6NEM1 432 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 LILRA5A6NI73 299 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 PRR19A6NJB7 356 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 C2orf81A6NN90 581 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 MIF4GDA9UHW6 222 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 STMND1H3BQB6 276 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 AGTP01019 485 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 VIPP01282 170 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 LPLP06858 475 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 NOS3P29474 1203 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 CSF2RBP32927 897 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 SLC16A1P53985 500 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 UBE2IP63279 158 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 PDE1BQ01064 536 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 NFATC2Q13469 925 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 TAF1AQ15573 450 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 TGIF1Q15583 401 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 DCAF12Q5T6F0 453 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 MBNL2Q5VZF2 373 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 HLA-DQA1Q5Y7H0 255 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 PEX26Q7Z412 305 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 ARHGAP22Q7Z5H3 698 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 GAS2L3Q86XJ1 694 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 PLXDC1Q8IUK5 500 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 ZNF547Q8IVP9 402 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 RBM12BQ8IXT5 1001 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 UBL4BQ8N7F7 174 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 GDAP1Q8TB36 358 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 ZNF398Q8TD17 642 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 WFDC12Q8WWY7 111 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 LRTOMTQ8WZ04 291 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 CCT6BQ92526 530 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 NCSTNQ92542 709 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 UTP4Q969X6 686 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 ZNF514Q96K75 400 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 TEFMQ96QE5 360 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 OSGEPL1Q9H4B0 414 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 FBXO8Q9NRD0 319 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 POT1Q9NUX5 634 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 SMOXQ9NWM0 555 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 ERVK13-1Q9NX77 482 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 ZNF624Q9P2J8 865 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 FEZ2Q9UHY8 353 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 COA3Q9Y2R0 106 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 IGSF10Q6WRI0 2623 aa9.62□□□□□ -0.87
HNRNPC-228ENST00000557033 STX7O15400 261 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 TOX3O15405 576 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 KCNN4O15554 427 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 UGT1A9O60656 530 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 MTX2O75431 263 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 POP7O75817 140 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 UGT1A6P19224 532 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 UGT1A1P22309 533 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 UGT1A4P22310 534 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 ADRA1AP35348 466 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 UGT1A3P35503 534 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 SNRPNP63162 240 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 MC2RQ01718 297 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 DMPKQ09013 629 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 CHRNA6Q15825 494 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 KHDC1Q4VXA5 237 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms