RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 H3BNC9 293 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 M0QX08 132 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ACSL4O60488 711 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 DNAJB5O75953 348 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SLC25A14O95258 325 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 MAGP20916 626 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 TACR1P25103 407 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 NEK2P51955 445 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 TPTEP56180 551 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 HUNKP57058 714 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ACOX1Q15067 660 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SYT16Q17RD7 645 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 USP39Q53GS9 565 aaKnown RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 C1QTNF12Q5T7M4 302 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 AGAP7PQ5VUJ5 663 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 DOK6Q6PKX4 331 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 CALHM3Q86XJ0 350 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SLC7A5P1Q8MH63 180 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 FBLIM1Q8WUP2 373 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ZNF566Q969W8 418 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ULK4Q96C45 1275 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 LGALS12Q96DT0 336 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 REXO5Q96IC2 774 aaKnown RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 PSD2Q9BQI7 771 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 CORO1BQ9BR76 489 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 YIPF2Q9BWQ6 316 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ADGRE3Q9BY15 652 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 CD244Q9BZW8 370 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 EPS8L2Q9H6S3 715 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 FBXO8Q9NRD0 319 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SCN3BQ9NY72 215 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 IL37Q9NZH6 218 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SCHIP1Q9P0W5 487 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 POU2F3Q9UKI9 436 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 TPRKBQ9Y3C4 175 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 A8MX80 341 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SLC28A1O00337 649 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 MANBAO00462 879 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 FAM20BO75063 409 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 RECQL5O94762 991 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 GJB5O95377 273 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 OXSR1O95747 527 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 RHOCP08134 193 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ITGAMP11215 1152 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 CD9P21926 228 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SERPINB10P48595 397 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SEPHS1P49903 392 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ST13P50502 369 aaKnown RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 MAD2L1Q13257 205 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 ARHGEF7Q14155 803 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 KCNJ8Q15842 424 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SYT6Q5T7P8 510 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 FAM171A1Q5VUB5 890 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ATG9BQ674R7 924 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SHQ1Q6PI26 577 aaKnown RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 RSPO2Q6UXX9 243 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 AHSA2Q719I0 299 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 VTCN1Q7Z7D3 282 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 SERPINA9Q86WD7 417 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 RASAL3Q86YV0 1011 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 PLD3Q8IV08 490 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 TTC29Q8NA56 475 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 GLB1L3Q8NCI6 653 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 OR6K2Q8NGY2 324 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 PDLIM5Q96HC4 596 aaKnown RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 EGLN2Q96KS0 407 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 DACH2Q96NX9 599 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 CPPED1Q9BRF8 314 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 FAM126AQ9BYI3 521 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 SLIRPQ9GZT3 109 aaKnown RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 NACA2Q9H009 215 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 CLPBQ9H078 707 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 MIR1-1HGQ9H1L0 117 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 TNKS2Q9H2K2 1166 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 MAGIXQ9H6Y5 334 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 ACOT13Q9NPJ3 140 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 PDP1Q9P0J1 537 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 KIAA1522Q9P206 1035 aaPredicted RBP11.12□□□□□ -0.63
SRP54-213ENST00000556994 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.12□□□□□ -0.63
SRP54-213ENST00000556994 Q9Y3F1 56 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 FAM220BPB1ANY3 271 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 RGS10O43665 173 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 NBNO60934 754 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 PABPC1P11940 636 aaKnown RBP11.11□□□□□ -0.63
SRP54-213ENST00000556994 AKR1A1P14550 325 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 CD36P16671 472 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 HOXA9P31269 272 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 S100A3P33764 101 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 CACNG1Q06432 222 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 RING1Q06587 406 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 DUSP4Q13115 394 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 SELENBP1Q13228 472 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 IL18R1Q13478 541 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 RFX4Q33E94 735 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 ZC3H12BQ5HYM0 836 aaKnown RBP11.11□□□□□ -0.63
SRP54-213ENST00000556994 CLLU1OSQ5K130 101 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 ATXN7L2Q5T6C5 722 aaPredicted RBP11.11□□□□□ -0.63
SRP54-213ENST00000556994 RNF219Q5W0B1 726 aaPredicted RBP11.11□□□□□ -0.63
SRP54-213ENST00000556994 OR2T5Q6IEZ7 315 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms