RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PIN1Q13526 163 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 GRB14Q14449 540 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ZMYND11Q15326 602 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 DNAL1Q4LDG9 190 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ANKRD20A4Q4UJ75 823 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 AGAP7PQ5VUJ5 663 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 RINT1Q6NUQ1 792 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CDC42EP5Q6NZY7 148 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 FUT10Q6P4F1 479 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 DCLRE1AQ6PJP8 1040 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 FAM180AQ6UWF9 173 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MEX3BQ6ZN04 569 aaKnown RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 C1QL2Q7Z5L3 287 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 PIGWQ7Z7B1 504 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 USP37Q86T82 979 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 AACSQ86V21 672 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TBC1D10CQ8IV04 446 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MCEMP1Q8IX19 187 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 FAM217AQ8IXS0 508 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 KIAA2013Q8IYS2 634 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 SYCE1Q8N0S2 351 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TAGAPQ8N103 731 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MPP5Q8N3R9 675 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TMEM199Q8N511 208 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 GMCL1P1Q8NEA9 526 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 OR2I1PQ8NGU4 316 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 URGCPQ8TCY9 931 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TCP10LQ8TDR4 215 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 LRRC8CQ8TDW0 803 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CCDC12Q8WUD4 166 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 PDCD6IPQ8WUM4 868 aaKnown RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CASKIN2Q8WXE0 1202 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 DDB2Q92466 427 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 AKAP1Q92667 903 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ATOH1Q92858 354 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 PHKBQ93100 1093 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MARC2Q969Z3 335 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MTBPQ96DY7 904 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MTMR8Q96EF0 704 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TMEM80Q96HE8 168 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MAGED4Q96JG8 741 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CCDC17Q96LX7 622 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 FAM227BQ96M60 508 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 NSMCE2Q96MF7 247 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 SLC2A13Q96QE2 648 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 SNX18Q96RF0 628 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CHCHD6Q9BRQ6 235 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TMEM79Q9BSE2 394 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CNPY3Q9BT09 278 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ZSCAN5AQ9BUG6 496 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 NFKBIZQ9BYH8 718 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 FRMD8P1Q9BZ68 369 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 BCL2L14Q9BZR8 327 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ECT2Q9H8V3 914 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CNOT10Q9H9A5 744 aaKnown RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CAB39LQ9H9S4 337 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CERS4Q9HA82 394 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 USP29Q9HBJ7 922 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CPNE5Q9HCH3 593 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MAN1C1Q9NR34 630 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 UFSP2Q9NUQ7 469 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TMEM140Q9NV12 185 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 EXD2Q9NVH0 621 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 NSMCE4AQ9NXX6 385 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 OBP2AQ9NY56 170 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 DACT1Q9NYF0 836 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 PKD2L2Q9NZM6 624 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 NCKIPSDQ9NZQ3 722 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 VSX1Q9NZR4 365 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 STX18Q9P2W9 335 aaKnown RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF212Q9UDV6 495 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 AFF4Q9UHB7 1163 aaKnown RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ACOT9Q9Y305 439 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 UTP11Q9Y3A2 253 aaKnown RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 NLRC5Q86WI3 1866 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CEP250Q9BV73 2442 aa4.34□□□□□ -1.72
ATXN3-227ENST00000554491 DNAH14Q0VDD8 3507 aa4.34□□□□□ -1.72
ATXN3-227ENST00000554491 TRIOO75962 3097 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 MCM3APO60318 1980 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ABHD14A-ACY1A0A1B0GW23 586 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 TTC26A0AVF1 554 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ESYT2A0FGR8 921 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 TMEM120BA0PK00 339 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 EIF4E1BA6NMX2 242 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 FAM25AB3EWG3 89 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 FAM25CB3EWG5 89 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 FAM25GB3EWG6 89 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 F5H423 210 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 RNF103O00237 685 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 O00370 1275 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 AIM2O14862 343 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SYN3O14994 580 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ANGPT2O15123 496 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SLC22A2O15244 555 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 GMDSO60547 372 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 EXOC3O60645 756 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 BCAS1O75363 584 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 GPR32O75388 356 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 CCNKO75909 580 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms