RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 FAM47EQ6ZV65 393 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 LRRC34Q8IZ02 419 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 CHCHD4Q8N4Q1 142 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 AFAP1L2Q8N4X5 818 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 SETD7Q8WTS6 366 aaKnown RBP16.88■□□□□ 0.29
LETMD1-220ENST00000549686 SMPDL3AQ92484 453 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 ZNF382Q96SR6 550 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 MIPEPQ99797 713 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 NUSAP1Q9BXS6 441 aaKnown RBP16.88■□□□□ 0.29
LETMD1-220ENST00000549686 DNAJC11Q9NVH1 559 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 GPRC5BQ9NZH0 403 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 CPNE7Q9UBL6 633 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 FAM221BA6H8Z2 402 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 E7ENX8 843 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 SLCO1B7G3V0H7 640 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 WDR47O94967 919 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 OTCP00480 354 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 EPHA8P29322 1005 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-220ENST00000549686 PKLRP30613 574 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 MPLP40238 635 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 TAP2Q03519 686 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 NAE1Q13564 534 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 TRIM61Q5EBN2 209 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 CES4AQ5XG92 561 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 OGFOD3Q6PK18 319 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 GOLGA7Q7Z5G4 137 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 CPLX4Q7Z7G2 160 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 NAGSQ8N159 534 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 TEX9Q8N6V9 391 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 OR52E1Q8NGJ3 308 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 OR2L8Q8NGY9 312 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 SLC37A2Q8TED4 501 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 SH3KBP1Q96B97 665 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 FAR2Q96K12 515 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 SORT1Q99523 831 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 SIKE1Q9BRV8 207 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 HAUS8Q9BT25 410 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 MENTQ9BUN1 341 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 DUSP23Q9BVJ7 150 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 SGPP1Q9BX95 441 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 UCK1Q9HA47 277 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 SLC40A1Q9NP59 571 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 SLCO1B3Q9NPD5 702 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 CCDC177Q9NQR7 707 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-220ENST00000549686 OR6C2Q9NZP2 312 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 A0A0C4DFX4 3053 aa16.87■□□□□ 0.29
LETMD1-220ENST00000549686 TNRC6BQ9UPQ9 1833 aaKnown RBP16.86■□□□□ 0.29
LETMD1-220ENST00000549686 ARHGAP33O14559 1287 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 ITM2AO43736 263 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 TROVE2P10155 538 aaKnown RBP eCLIP16.86■□□□□ 0.29
LETMD1-220ENST00000549686 ALPPL2P10696 532 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 FASLGP48023 281 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 CCT8P50990 548 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 SEC24CP53992 1094 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 CDH13P55290 713 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 PCDH1Q08174 1060 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 CDC16Q13042 620 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 HLA-BQ31612 363 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 C18orf21Q32NC0 220 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-220ENST00000549686 PRAMEF14Q5SWL7 426 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 CUZD1Q86UP6 607 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 THOC6Q86W42 341 aaKnown RBP16.86■□□□□ 0.29
LETMD1-220ENST00000549686 C17orf82Q86X59 251 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-220ENST00000549686 LRRC56Q8IYG6 542 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-220ENST00000549686 LSMEM2Q8N112 164 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 PIWIL2Q8TC59 973 aaKnown RBP16.86■□□□□ 0.29
LETMD1-220ENST00000549686 TRPC4APQ8TEL6 797 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 ATP6V1E2Q96A05 226 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 ESAMQ96AP7 390 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 MED8Q96G25 268 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 ATG10Q9H0Y0 220 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 IPPKQ9H8X2 491 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 SEMA4BQ9NPR2 832 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-220ENST00000549686 FGFR1OP2Q9NVK5 253 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 KCNE2Q9Y6J6 123 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 R4GN57 208 aa16.86■□□□□ 0.29
LETMD1-220ENST00000549686 LRRC14BA6NHZ5 514 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 B4DGG1 531 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 KHNYNO15037 678 aaKnown RBP16.85■□□□□ 0.29
LETMD1-220ENST00000549686 UGDHO60701 494 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 SDC3O75056 442 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 LYPLA1O75608 230 aaPredicted RBP16.85■□□□□ 0.29
LETMD1-220ENST00000549686 ESRRBO95718 433 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 FAM107AO95990 144 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 CHRNGP07510 517 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 FGF4P08620 206 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 DRD4P21917 467 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 GDF5P43026 501 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 RPL14P50914 215 aaKnown RBP16.85■□□□□ 0.29
LETMD1-220ENST00000549686 CCNG1P51959 295 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 TBPL1P62380 186 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 HHEXQ03014 270 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 SHBQ15464 509 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 RBBP7Q16576 425 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 ZXDCQ2QGD7 858 aaPredicted RBP16.85■□□□□ 0.29
LETMD1-220ENST00000549686 FBXO48Q5FWF7 155 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 C6orf132Q5T0Z8 1188 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 LCTLQ6UWM7 567 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 GPRIN3Q6ZVF9 776 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 EFL1Q7Z2Z2 1120 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms