RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PSMC4P43686 418 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 CDH12P55289 794 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 HNRNPKP61978 463 aaKnown RBP eCLIP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 CSNK2A1P68400 391 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 GALK2Q01415 458 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 PRKCEQ02156 737 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 FOXM1Q08050 763 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 TNK1Q13470 666 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 GAMTQ14353 236 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 SMTNL2Q2TAL5 461 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 EIF2S3LQ2VIR3 472 aaKnown RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 FAM174BQ3ZCQ3 159 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 CCDC40Q4G0X9 1142 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 DCST1Q5T197 706 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 PRAMEF8Q5VWM4 474 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 NSUN5P2Q63ZY6 315 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 ZNF324BQ6AW86 544 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 BRAT1Q6PJG6 821 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 TRAPPC11Q7Z392 1133 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 ARMC9Q7Z3E5 817 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 ZNF410Q86VK4 478 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 PALB2Q86YC2 1186 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 RASGEF1CQ8N431 466 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 TMEM199Q8N511 208 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 EMC1Q8N766 993 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 SLC44A5Q8NCS7 719 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 PAPD5Q8NDF8 572 aaKnown RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 CSNK2A3Q8NEV1 391 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 EXOC6Q8TAG9 804 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 APBB2Q92870 758 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 SNRNP40Q96DI7 357 aaKnown RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 FAM84BQ96KN1 310 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 PKNOX2Q96KN3 472 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 SEMA3CQ99985 751 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 TEX13AQ9BXU3 409 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 B3GNT4Q9C0J1 378 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 ESRP2Q9H6T0 727 aaKnown RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 AAMDCQ9H7C9 122 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 PPANQ9NQ55 473 aaKnown RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 OR6C3Q9NZP0 311 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 ZNF624Q9P2J8 865 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 TRMT6Q9UJA5 497 aaKnown RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 ACSL5Q9ULC5 683 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 RNF150Q9ULK6 438 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 MAGI3Q5TCQ9 1506 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 KIAA0556O60303 1618 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 LRP5O75197 1615 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 TMEM189-UBE2V1I3L0A0 370 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 PTGESO14684 152 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 CTDSPLO15194 276 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 XRCC3O43542 346 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 FCGR3BO75015 233 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 PRDM1O75626 825 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 RAD51DO75771 328 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 NDUFB8O95169 186 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 G6PDP11413 515 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 AREGP15514 252 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 TCF4P15884 667 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 LBPP18428 481 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 ARRB2P32121 409 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 AVPR1AP37288 418 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 EIF2S3P41091 472 aaKnown RBP4.09□□□□□ -1.75
SCAF11-210ENST00000547654 IFNAR2P48551 515 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 SLC9A3P48764 834 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 SERPINH1P50454 418 aaKnown RBP4.09□□□□□ -1.75
SCAF11-210ENST00000547654 ZNF132P52740 706 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 FOLH1Q04609 750 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 PRKCZQ05513 592 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 UBE2V1Q13404 147 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 FASTKD1Q53R41 847 aaKnown RBP4.09□□□□□ -1.75
SCAF11-210ENST00000547654 FRG2Q64ET8 278 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 ANKRD54Q6NXT1 300 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 SLC27A1Q6PCB7 646 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 GSG1LQ6UXU4 331 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 MEX3BQ6ZN04 569 aaKnown RBP4.09□□□□□ -1.75
SCAF11-210ENST00000547654 RGS9BPQ6ZS82 235 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 ZER1Q7Z7L7 766 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 PATL1Q86TB9 770 aaKnown RBP4.09□□□□□ -1.75
SCAF11-210ENST00000547654 NR2C2APQ86WQ0 139 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 GPSM1Q86YR5 675 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 SERPINA12Q8IW75 414 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 CFAP206Q8IYR0 622 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 RBFAQ8N0V3 343 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 FBXL14Q8N1E6 418 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 LRRC8CQ8TDW0 803 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 PPP4R1Q8TF05 950 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 INPP5DQ92835 1189 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 ORAI1Q96D31 301 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 CFAP36Q96G28 342 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 LMLNQ96KR4 655 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 PRMT6Q96LA8 375 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-210ENST00000547654 NSMCE2Q96MF7 247 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 ZNF560Q96MR9 790 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 SPATA33Q96N06 139 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 OR6C1Q96RD1 312 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 FEVQ99581 238 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 TXN2Q99757 166 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 P2RY12Q9H244 342 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 MAP6D1Q9H9H5 199 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 SLC35D1Q9NTN3 355 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms