RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 GPRC5AQ8NFJ5 357 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 HASPINQ8TF76 798 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 SLC6A13Q9NSD5 602 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 FAM105AQ9NUU6 356 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 PDP1Q9P0J1 537 aaPredicted RBP13.88□□□□□ -0.19
SRP54-202ENST00000546080 ZNF221Q9UK13 617 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 A3GALT2U3KPV4 340 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 POLR2AP24928 1970 aaKnown RBP13.88□□□□□ -0.19
SRP54-202ENST00000546080 ARL5CA6NH57 179 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 C2orf81A6NN90 581 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 SLC28A1O00337 649 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 FFAR3O14843 346 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 GPR42O15529 346 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 ERN1O75460 977 aaKnown RBP13.88□□□□□ -0.19
SRP54-202ENST00000546080 B3GAT3O94766 335 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 FPR1P21462 350 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 HOXA9P31269 272 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 DNAJA1P31689 397 aaKnown RBP13.88□□□□□ -0.19
SRP54-202ENST00000546080 PIK3CGP48736 1102 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 HMGCS1Q01581 520 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 TAF1AQ15573 450 aaPredicted RBP13.88□□□□□ -0.19
SRP54-202ENST00000546080 DDR2Q16832 855 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 PIANPQ8IYJ0 282 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 ELMOD1Q8N336 334 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 CHCHD4Q8N4Q1 142 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 ATG16L2Q8NAA4 619 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 DNAJB8Q8NHS0 232 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 CLHC1Q8NHS4 586 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 KCNJ9Q92806 393 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 TRIB3Q96RU7 358 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 ITM2CQ9NQX7 267 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 CPA4Q9UI42 421 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 FNDC3AQ9Y2H6 1198 aaKnown RBP13.88□□□□□ -0.19
SRP54-202ENST00000546080 IGLV3-10A0A075B6K4 115 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 PRAMEF11O60813 436 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 SEC22BO75396 215 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 CCNDBP1O95273 360 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 ITGB6P18564 788 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 EPHA2P29317 976 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 OR1E1P30953 314 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 MC4RP32245 332 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 GZMMP51124 257 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 SMU1Q2TAY7 513 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 ZRANB3Q5FWF4 1079 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 AGAP6Q5VW22 663 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 FBXL22Q6P050 247 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 MOB2Q70IA6 237 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 GDPD3Q7L5L3 318 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 P3H2Q8IVL5 708 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 CELF2-AS1Q8N7Q2 184 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 KBTBD8Q8NFY9 601 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 UBE2FQ969M7 185 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 RPRD1AQ96P16 312 aaPredicted RBP13.87□□□□□ -0.19
SRP54-202ENST00000546080 AGAP4Q96P64 663 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 SIGLEC11Q96RL6 698 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 COPS4Q9BT78 406 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 REXO4Q9GZR2 422 aaKnown RBP13.87□□□□□ -0.19
SRP54-202ENST00000546080 IL1RAPQ9NPH3 570 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 PATJQ8NI35 1801 aa13.87□□□□□ -0.19
SRP54-202ENST00000546080 MYO16Q9Y6X6 1858 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 hCG_2039718K7EN88 272 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 DSCR3O14972 297 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 GPR182O15218 404 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 WBP4O75554 376 aaKnown RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 DIRAS1O95057 198 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 CD9P21926 228 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 GNPDA1P46926 289 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 HSPA7P48741 367 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 CREMQ03060 361 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 ABHD18Q0P651 414 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 TIGD6Q17RP2 521 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 PRSS36Q5K4E3 855 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 OVOS1Q6IE37 1185 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 UTS2BQ765I0 119 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 ADAMTSL2Q86TH1 951 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 RAVER1Q8IY67 606 aaKnown RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 THEM5Q8N1Q8 247 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 CARNMT1Q8N4J0 409 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 MDGA1Q8NFP4 955 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 NXF2Q9GZY0 626 aaKnown RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 KCNH6Q9H252 994 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 ABHD16BQ9H3Z7 469 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 LRTM1Q9HBL6 345 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 CCDC177Q9NQR7 707 aaPredicted RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 CCDC59Q9P031 241 aaKnown RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 RAPGEFL1Q9UHV5 662 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 CAB39Q9Y376 341 aaPredicted RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 SAMHD1Q9Y3Z3 626 aaKnown RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 ANGPTL3Q9Y5C1 460 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 PCNTO95613 3336 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 A0A096LPI6 279 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 IQCF5A8MTL0 148 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 PDZK1P1A8MUH7 402 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 CENPBD1B2RD01 187 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 M0R082 166 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 WNT9AO14904 365 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 FFAR2O15552 330 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 PCDHGA12O60330 932 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 GUCY1B2O75343 617 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms