RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 SMPDL3AQ92484 453 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 NAT6Q93015 286 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 CNDP1Q96KN2 507 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 PKP4Q99569 1192 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 MENTQ9BUN1 341 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 CD244Q9BZW8 370 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 UNKQ9C0B0 810 aaKnown RBP15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 UTP6Q9NYH9 597 aaKnown RBP15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 GPRC5BQ9NZH0 403 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 SCHIP1Q9P0W5 487 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 STOX2Q9P2F5 926 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 NCDNQ9UBB6 729 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 DMDP11532 3685 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 EP300Q09472 2414 aaPredicted RBP15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 LNP1A1A4G5 178 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 PATE3B3GLJ2 98 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 B4DGG1 531 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 MLYCDO95822 493 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 EML2O95834 649 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 SLC16A8O95907 504 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 GIMD1P0DJR0 217 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 ALDH3A1P30838 453 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 MDH1P40925 334 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 GRK6P43250 576 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 BDKRB1P46663 353 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 DUSP3P51452 185 aaPredicted RBP15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 PNLIPRP1P54315 467 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 PCDH1Q08174 1060 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 CLPPQ16740 277 aaPredicted RBP15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 CFAP157Q5JU67 520 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 ZNF678Q5SXM1 525 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 C10orf107Q8IVU9 208 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 ARL14Q8N4G2 192 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 OR52E1Q8NGJ3 308 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 PPP1R14CQ8TAE6 165 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 LRRC8CQ8TDW0 803 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 ZNF480Q8WV37 535 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 CKAP2Q8WWK9 683 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 HAUS8Q9BT25 410 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 HGH1Q9BTY7 390 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 SGPP1Q9BX95 441 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 SLC32A1Q9H598 525 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 CCDC177Q9NQR7 707 aaPredicted RBP15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 UCKL1Q9NWZ5 548 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 OPTCQ9UBM4 332 aa15.54■□□□□ 0.08
PRPF40A-212ENST00000545856 RIF1Q5UIP0 2472 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 E7ENX8 843 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 K7EPI3 171 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 UGDHO60701 494 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 CCNDBP1O95273 360 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 GUCA1CO95843 209 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 NEFHP12036 1026 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 GLB1P16278 677 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 KCNA4P22459 653 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 TAP2Q03519 686 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 BNIP3Q12983 259 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 BIRC2Q13490 618 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 SYTL1Q8IYJ3 562 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 CARFQ8N187 725 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 MDM1Q8TC05 714 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 MGARPQ8TDB4 240 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 LCN9Q8WX39 176 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 EXT2Q93063 718 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 ZBTB9Q96C00 473 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 PAIP2Q9BPZ3 127 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 MANSC1Q9H8J5 431 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 EML4Q9HC35 981 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 SEMA4GQ9NTN9 838 aa15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 TSR3Q9UJK0 312 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 TDRKHQ9Y2W6 561 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-212ENST00000545856 SDC3O75056 442 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 FGF3P11487 239 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 EPB42P16452 691 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 HRH2P25021 359 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 ATP1A2P50993 1020 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 HK2P52789 917 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 GPLD1P80108 840 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 ABATP80404 500 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 LCP2Q13094 533 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 GPR18Q14330 331 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 KIR2DS3Q14952 304 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 DEFB133Q30KQ1 61 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 C10orf62Q5T681 223 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 LCTLQ6UWM7 567 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 FRMD7Q6ZUT3 714 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 TAX1BP1Q86VP1 789 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 AMIGO1Q86WK6 493 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 LRRC56Q8IYG6 542 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 PPP4R1Q8TF05 950 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 ZNF483Q8TF39 744 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 TMEM237Q96Q45 408 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 TMEM79Q9BSE2 394 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 GTPBP2Q9BX10 602 aaKnown RBP15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 DRC3Q9H069 523 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 RAB33BQ9H082 229 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 EHD1Q9H4M9 534 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 TMEM9BQ9NQ34 198 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 DNAJC11Q9NVH1 559 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 THAP1Q9NVV9 213 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 PCTPQ9UKL6 214 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms