RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 GARSP41250 739 aaKnown RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 HK3P52790 923 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 NDST2P52849 883 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 NAP1L1P55209 391 aaKnown RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 RPS24P62847 133 aaKnown RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 GABPB1Q06547 395 aaPredicted RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 LAMB3Q13751 1172 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 BOLA3Q53S33 107 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 LRRC38Q5VT99 294 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 CD276Q5ZPR3 534 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 C11orf63Q6NUN7 778 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 PAQR3Q6TCH7 311 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 GFRALQ6UXV0 394 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 MED25Q71SY5 747 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 ARHGAP22Q7Z5H3 698 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 LILRA2Q8N149 483 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 CARNMT1Q8N4J0 409 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 TRIM58Q8NG06 486 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 FIBINQ8TAL6 211 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 ADAMTS17Q8TE56 1095 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 DQX1Q8TE96 717 aaKnown RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 CT55Q8WUE5 264 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 RXFP2Q8WXD0 754 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 TM9SF4Q92544 642 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 CENPIQ92674 756 aaPredicted RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 PRICKLE1Q96MT3 831 aaPredicted RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 AMBRA1Q9C0C7 1298 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 PITHD1Q9GZP4 211 aaPredicted RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 RETREG1Q9H6L5 497 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 ZDHHC6Q9H6R6 413 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 DDIT4Q9NX09 232 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 DTLQ9NZJ0 730 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 SH3BGRL2Q9UJC5 107 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 ANAPC7Q9UJX3 599 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 INTS6Q9UL03 887 aaKnown RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 PPP2R2CQ9Y2T4 447 aa6.57□□□□□ -1.36
LDHA-223ENST00000545215 REXO2Q9Y3B8 237 aaKnown RBP6.57□□□□□ -1.36
LDHA-223ENST00000545215 EPPK1P58107 5090 aaKnown RBP6.56□□□□□ -1.36
LDHA-223ENST00000545215 CCDC154A6NI56 674 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 MIF4GDA9UHW6 222 aaKnown RBP6.56□□□□□ -1.36
LDHA-223ENST00000545215 KIF1CO43896 1103 aaKnown RBP6.56□□□□□ -1.36
LDHA-223ENST00000545215 PRPSAP2O60256 369 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 KIF5CO60282 957 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 SLCO2B1O94956 709 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 MOCS3O95396 460 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 ALPPP05187 535 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 ARL4AP40617 200 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 CXCR3P49682 368 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 SULT1E1P49888 294 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 RPS18P62269 152 aaKnown RBP6.56□□□□□ -1.36
LDHA-223ENST00000545215 RPL7AP62424 266 aaKnown RBP6.56□□□□□ -1.36
LDHA-223ENST00000545215 DEUP1Q05D60 604 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 MALLQ13021 153 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 EIF4EBP2Q13542 120 aaPredicted RBP6.56□□□□□ -1.36
LDHA-223ENST00000545215 SLC9A5Q14940 896 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 ADRM1Q16186 407 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 CCDC14Q49A88 953 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 C2CD6Q53TS8 623 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 MS4A13Q5J8X5 152 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 SYPL2Q5VXT5 272 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 NKAIN2Q5VXU1 208 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 NADSYN1Q6IA69 706 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 TMEM71Q6P5X7 295 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 FAM180AQ6UWF9 173 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 PAMR1Q6UXH9 720 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 BNIPLQ7Z465 357 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 POLNQ7Z5Q5 900 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 TAC4Q86UU9 113 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 ZSCAN30Q86W11 494 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 CHSY1Q86X52 802 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 VSIG1Q86XK7 387 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 LGI2Q8N0V4 545 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 CFAP52Q8N1V2 620 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 BCORP1Q8N888 145 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 ATP6V0D2Q8N8Y2 350 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 MNS1Q8NEH6 495 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 KIAA1524Q8TCG1 905 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 TEKT4Q8WW24 435 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 NTAN1Q96AB6 310 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 ARHGEF26Q96DR7 871 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 MYEOVQ96EZ4 313 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 TSPAN17Q96FV3 270 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 BTN2A3PQ96KV6 586 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 C1orf74Q96LT6 269 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 DESI2Q9BSY9 194 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 PACSIN1Q9BY11 444 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 LRTM1Q9HBL6 345 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 LHX9Q9NQ69 397 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 GPR160Q9UJ42 338 aa6.56□□□□□ -1.36
LDHA-223ENST00000545215 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.56□□□□□ -1.36
LDHA-223ENST00000545215 UQCRHLA0A096LP55 91 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 C1QTNF3-AMACRE9PGA6 284 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 F5H5T6 163 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 KIF2AO00139 706 aaPredicted RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 ARHGEF9O43307 516 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 SPOPO43791 374 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 GRAP2O75791 330 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 UQCRHP07919 91 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 HOXD4P09016 255 aaPredicted RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 TACR2P21452 398 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms