RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PDAP1Q13442 181 aaKnown RBP18.49■□□□□ 0.55
DDX55-211ENST00000544429 EFTUD2Q15029 972 aaKnown RBP eCLIP18.49■□□□□ 0.552e-11■■■■■ 32.6
DDX55-211ENST00000544429 TTC23LQ6PF05 361 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 OR9A1PQ8NGU1 263 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 USP7Q93009 1102 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 ELMO2Q96JJ3 720 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 SPRY4Q9C004 299 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 CHRNA10Q9GZZ6 450 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 ACSS3Q9H6R3 686 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 CIDEBQ9UHD4 219 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 TSR3Q9UJK0 312 aaKnown RBP18.49■□□□□ 0.55
DDX55-211ENST00000544429 GSAPA4D1B5 854 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 AGRPO00253 132 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 PRAMEF10O60809 474 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 ZBTB11O95625 1053 aaPredicted RBP18.48■□□□□ 0.55
DDX55-211ENST00000544429 TNFRSF8P28908 595 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 RAB15P59190 212 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 IL2P60568 153 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 SH3BP2P78314 561 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 HSD11B2P80365 405 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 POU4F1Q01851 419 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 SP140Q13342 867 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 ARHGAP19Q14CB8 494 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 ZKSCAN8Q15776 578 aaPredicted RBP18.48■□□□□ 0.55
DDX55-211ENST00000544429 SLC5A12Q1EHB4 618 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 GRTP1Q5TC63 336 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 ANKS6Q68DC2 871 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 FAM129CQ86XR2 697 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 PPM1NQ8N819 430 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 ANKRD7Q92527 254 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 LINGO1Q96FE5 620 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 TRAPPC9Q96Q05 1148 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 SLC12A9Q9BXP2 914 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 FOXJ2Q9P0K8 574 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 ADAMTS6Q9UKP5 1117 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 ZMIZ1Q9ULJ6 1067 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 SSUH2Q9Y2M2 353 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 B3GALT1Q9Y5Z6 326 aa18.48■□□□□ 0.55
DDX55-211ENST00000544429 A0A1W2PPV9 198 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 SLC16A5O15375 505 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 FAM155BO75949 473 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 C8GP07360 202 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 ST6GAL1P15907 406 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 PHBP35232 272 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 CSRP3P50461 194 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 MAPK10P53779 464 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 SLMAPQ14BN4 828 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 FBXO38Q6PIJ6 1188 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 UBE2R2Q712K3 238 aaPredicted RBP18.47■□□□□ 0.55
DDX55-211ENST00000544429 CTAGE3PQ8IX95 158 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 LMNTD1Q8N9Z9 388 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 SLC22A18Q96BI1 424 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 CYTH2Q99418 400 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 PKP4Q99569 1192 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 ASPSCR1Q9BZE9 553 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 APMAPQ9HDC9 416 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 SLC39A1Q9NY26 324 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 TXNDC16Q9P2K2 825 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 SLC39A10Q9ULF5 831 aa18.47■□□□□ 0.55
DDX55-211ENST00000544429 HEATR5BQ9P2D3 2071 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 SPTBP11277 2137 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 A0A087WV48 116 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 HMX2A2RU54 273 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 SLC9B1P1A6NJY1 282 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 ZBTB14O43829 449 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 SLC16A8O95907 504 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 FAM153BP0C7A2 387 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 MYBL2P10244 700 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 FGF5P12034 268 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 FOLR1P15328 257 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 CDH3P22223 829 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 SPRP35270 261 aaPredicted RBP18.46■□□□□ 0.55
DDX55-211ENST00000544429 EIF2S3P41091 472 aaKnown RBP18.46■□□□□ 0.55
DDX55-211ENST00000544429 PCBP4P57723 403 aaKnown RBP18.46■□□□□ 0.55
DDX55-211ENST00000544429 ZNF460Q14592 562 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 IL11RAQ14626 422 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 FAM153CQ494X1 144 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 TEX35Q5T0J7 233 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 DCAF12Q5T6F0 453 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 DTX1Q86Y01 620 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 LRRC56Q8IYG6 542 aaPredicted RBP18.46■□□□□ 0.55
DDX55-211ENST00000544429 MYO1HQ8N1T3 1032 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 OR2A1Q8NGT9 310 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 ANKRD49Q8WVL7 239 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 TEFMQ96QE5 360 aaKnown RBP18.46■□□□□ 0.55
DDX55-211ENST00000544429 ZPBPQ9BS86 351 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 ANKZF1Q9H8Y5 726 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 PARVBQ9HBI1 364 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 IKZF3Q9UKT9 509 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 PDE10AQ9Y233 779 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 RAXQ9Y2V3 346 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 KLK4Q9Y5K2 254 aa18.46■□□□□ 0.55
DDX55-211ENST00000544429 A0A0J9YY10 115 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 POLR1CO15160 346 aaPredicted RBP18.45■□□□□ 0.54
DDX55-211ENST00000544429 FKBP9O95302 570 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 ACSL3O95573 720 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 ABHD2P08910 425 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 PVRP15151 417 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 CD82P27701 267 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 HSD17B2P37059 387 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms