RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CCL4L1Q8NHW4 92 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 METTL6Q8TCB7 284 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 FERD3LQ96RJ6 166 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 WASH6PQ9NQA3 447 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 PRMT8Q9NR22 394 aaPredicted RBP29.55■■■□□ 2.32
CCM2-219ENST00000544363 TBC1D29Q9UFV1 150 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 TRPS1Q9UHF7 1281 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 ATXN2Q99700 1313 aaKnown RBP29.54■■■□□ 2.32
CCM2-219ENST00000544363 A0A1W2PR77 199 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 KIAA0754O94854 1291 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 UBOX5O94941 541 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 CAPN1P07384 714 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 HGFP14210 728 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 MAOBP27338 520 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 PNLIPRP1P54315 467 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 ABRAXAS1Q6UWZ7 409 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 IQCHQ86VS3 1027 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 ACTRT2Q8TDY3 377 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 TUBB1Q9H4B7 451 aa29.54■■■□□ 2.32
CCM2-219ENST00000544363 IMP3Q9NV31 184 aaKnown RBP29.54■■■□□ 2.32
CCM2-219ENST00000544363 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 PIP5K1BO14986 540 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 CLDN9O95484 217 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 WNT1P04628 370 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 ACTR1BP42025 376 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 ACTR1AP61163 376 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 GALNTL6Q49A17 601 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 TJAP1Q5JTD0 557 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 NXNQ6DKJ4 435 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 LRRC56Q8IYG6 542 aaPredicted RBP29.53■■■□□ 2.32
CCM2-219ENST00000544363 TMEFF1Q8IYR6 380 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 CEP70Q8NHQ1 597 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 PRR11Q96HE9 360 aaPredicted RBP29.53■■■□□ 2.32
CCM2-219ENST00000544363 DUSP15Q9H1R2 295 aaPredicted RBP29.53■■■□□ 2.32
CCM2-219ENST00000544363 LNPEPQ9UIQ6 1025 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 PCOLCE2Q9UKZ9 415 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 PLAGL1Q9UM63 463 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 RNF11Q9Y3C5 154 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 TECTAO75443 2155 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 E7ENX8 843 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 E9PBE3 544 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 KLHL41O60662 606 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 HALP42357 657 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 TAP2Q03519 686 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 ARHGAP19Q14CB8 494 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 TCEA2Q15560 299 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 RPE65Q16518 533 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 SPDYAQ5MJ70 313 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 CAPN13Q6MZZ7 669 aaPredicted RBP29.53■■■□□ 2.32
CCM2-219ENST00000544363 PARGQ86W56 976 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 NRROSQ86YC3 692 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 DDIASQ8IXT1 998 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 RGL4Q8IZJ4 473 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 OR4K3Q96R72 315 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 SGPP1Q9BX95 441 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 MIR1-1HGQ9H1L0 117 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 MVB12BQ9H7P6 319 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 ACTR8Q9H981 624 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 SCHIP1Q9P0W5 487 aaPredicted RBP29.53■■■□□ 2.32
CCM2-219ENST00000544363 TRIM33Q9UPN9 1127 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 BTRCQ9Y297 605 aa29.53■■■□□ 2.32
CCM2-219ENST00000544363 ERGP11308 486 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 HMOX2P30519 316 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 HSD17B2P37059 387 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 FNTBP49356 437 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 TBPL1P62380 186 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 ILF3Q12906 894 aaKnown RBP eCLIP29.52■■■□□ 2.32
CCM2-219ENST00000544363 SLC30A9Q6PML9 568 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 HOMEZQ8IX15 550 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 GPBAR1Q8TDU6 330 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 C3orf30Q96M34 536 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 IL17FQ96PD4 163 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 TM9SF3Q9HD45 589 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 SAR1AQ9NR31 198 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 SPATA7Q9P0W8 599 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 POLG2Q9UHN1 485 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 KLF15Q9UIH9 416 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 HEBP2Q9Y5Z4 205 aa29.52■■■□□ 2.32
CCM2-219ENST00000544363 CEP192Q8TEP8 1941 aa29.51■■■□□ 2.32
CCM2-219ENST00000544363 CACNA1IQ9P0X4 2223 aa29.51■■■□□ 2.32
CCM2-219ENST00000544363 OR52A4PA6NMU1 304 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 LAMTOR5O43504 91 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 TDGF1P13385 188 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 HNRNPH2P55795 449 aaKnown RBP29.51■■■□□ 2.31
CCM2-219ENST00000544363 FAM91A1Q658Y4 838 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 C1orf216Q8TAB5 229 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 DNASE2BQ8WZ79 361 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 CAMK1GQ96NX5 476 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 CCT7Q99832 543 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 TCEAL2Q9H3H9 227 aaPredicted RBP29.51■■■□□ 2.31
CCM2-219ENST00000544363 PFDN4Q9NQP4 134 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 PTGDR2Q9Y5Y4 395 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 ABCA7Q8IZY2 2146 aa29.51■■■□□ 2.31
CCM2-219ENST00000544363 TMEM221A6NGB7 291 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 M0R296 226 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 MTHFD1P11586 935 aaKnown RBP29.5■■■□□ 2.31
CCM2-219ENST00000544363 NCF2P19878 526 aaPredicted RBP29.5■■■□□ 2.31
CCM2-219ENST00000544363 BLKP51451 505 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 DMTNQ08495 405 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 FASTKQ14296 549 aaKnown RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms