RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 TAS2R16Q9NYV7 291 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 ATPIF1Q9UII2 106 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 SAMHD1Q9Y3Z3 626 aaKnown RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 ASB1Q9Y576 335 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 ZNF780AO75290 641 aaPredicted RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 SCELO95171 688 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 NPR3P17342 541 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 CFL1P23528 166 aaKnown RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 SLC19A1P41440 591 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 IDH2P48735 452 aaKnown RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 BACE1P56817 501 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 CXCR4P61073 352 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 GRIK2Q13002 908 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 RFTN2Q52LD8 501 aaPredicted RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 INTS6LQ5JSJ4 861 aaKnown RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 FBXO47Q5MNV8 452 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 KIAA0319Q5VV43 1072 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 FAM122CQ6P4D5 195 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 SLC46A3Q7Z3Q1 461 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 CCDC71Q8IV32 467 aaPredicted RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 CRYBG2Q8N1P7 616 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 STX19Q8N4C7 294 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 AADATQ8N5Z0 425 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 ST13P5Q8NFI4 369 aaPredicted RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 BLOC1S5Q8TDH9 187 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 FBLIM1Q8WUP2 373 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 SLC13A3Q8WWT9 602 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 PDLIM5Q96HC4 596 aaKnown RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 KLHL5Q96PQ7 755 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 KCNC2Q96PR1 638 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 ZBTB18Q99592 522 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 ACTL8Q9H568 366 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 DCAF13Q9NV06 445 aaKnown RBP12.39□□□□□ -0.43
SMG8-202ENST00000543872 CD274Q9NZQ7 290 aa12.39□□□□□ -0.43
SMG8-202ENST00000543872 A0A1W2PQ09 198 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 EFCAB10A6NFE3 127 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 TNFRSF21O75509 655 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 NPPAP01160 153 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 CNPP09543 421 aaKnown RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 PRR35P0CG20 571 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 AKT1P31749 480 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 RPL38P63173 70 aaKnown RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 SLC14A2Q15849 920 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 ZC3H12BQ5HYM0 836 aaKnown RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 ZNF648Q5T619 568 aaPredicted RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 B3GALNT2Q8NCR0 500 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 FLCNQ8NFG4 579 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 LRRC20Q8TCA0 184 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 PYURFQ96I23 114 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 RIPOR3Q96MK2 946 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 GPR20Q99678 358 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 GPR83Q9NYM4 423 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 HSPB11Q9Y547 144 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 A8MUA0 341 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 PER2O15055 1255 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 ELP6Q0PNE2 266 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 SPANXN4Q5MJ08 99 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 CAPN13Q6MZZ7 669 aaPredicted RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 ANKRD46Q86W74 232 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 FAM217AQ8IXS0 508 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 C10orf111Q8N326 155 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 PGBD5Q8N414 524 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 YIPF7Q8N8F6 280 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 IPCEF1Q8WWN9 437 aaPredicted RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 SARS2Q9NP81 518 aaKnown RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 CFL2Q9Y281 166 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 ZNF451Q9Y4E5 1061 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 FADS2P1A8MWK0 482 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 WDR47O94967 919 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 GLP2RO95838 553 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 MOCS2O96007 188 aaPredicted RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 ITGB1P05556 798 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 INSRRP14616 1297 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 MYL9P24844 172 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 CCNCP24863 283 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 DMC1Q14565 340 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 MED22Q15528 200 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 KIAA1614Q5VZ46 1190 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 C9orf57Q5W0N0 161 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 SHQ1Q6PI26 577 aaKnown RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 CCDC190Q86UF4 302 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 CACTIN-AS1Q8N1I8 211 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 CAMKK1Q8N5S9 505 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 GPR151Q8TDV0 419 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 NTAN1Q96AB6 310 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 CNPPD1Q9BV87 410 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 RERGLQ9H628 205 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 TMPRSS11EQ9UL52 423 aa12.38□□□□□ -0.43
SMG8-202ENST00000543872 ZNF490Q9ULM2 529 aaPredicted RBP12.38□□□□□ -0.43
SMG8-202ENST00000543872 COL1A2P08123 1366 aa12.37□□□□□ -0.43
SMG8-202ENST00000543872 M0R129 80 aa12.37□□□□□ -0.43
SMG8-202ENST00000543872 STAU1O95793 577 aaKnown RBP12.37□□□□□ -0.43
SMG8-202ENST00000543872 PTHP01270 115 aa12.37□□□□□ -0.43
SMG8-202ENST00000543872 SLC10A3P09131 477 aa12.37□□□□□ -0.43
SMG8-202ENST00000543872 HCAR3P49019 387 aa12.37□□□□□ -0.43
SMG8-202ENST00000543872 EFR3AQ14156 821 aa12.37□□□□□ -0.43
SMG8-202ENST00000543872 CACHD1Q5VU97 1274 aa12.37□□□□□ -0.43
SMG8-202ENST00000543872 OR2T5Q6IEZ7 315 aa12.37□□□□□ -0.43
SMG8-202ENST00000543872 GPRIN1Q7Z2K8 1008 aa12.37□□□□□ -0.43
SMG8-202ENST00000543872 TSPYL5Q86VY4 417 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms