RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 EPHX4Q8IUS5 362 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 ARL14EPQ8N8R7 260 aaPredicted RBP8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 ACDQ96AP0 544 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 FRG2BQ96QU4 278 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 C1QTNF1Q9BXJ1 281 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 HDHD2Q9H0R4 259 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 MAGEE1Q9HCI5 957 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 AGPAT4Q9NRZ5 378 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 VPS29Q9UBQ0 182 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 CLCA2Q9UQC9 943 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 SLC22A14Q9Y267 594 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 PEX16Q9Y5Y5 336 aa8.03□□□□□ -1.12
PRKAB1-207ENST00000542698 FADS2P1A8MWK0 482 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 H3BM21 787 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 ZNF701M0R085 212 aaPredicted RBP8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 MANBAO00462 879 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 SERPINB7O75635 380 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 CLDN7O95471 211 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 RPLP0P05388 317 aaKnown RBP8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 ANXA8P13928 327 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 ELNP15502 786 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 S100A1P23297 94 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 OXTRP30559 389 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 MAGEA11P43364 429 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 MAGEA12P43365 314 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 BCAP31P51572 246 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 IST1P53990 364 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 UGT2B15P54855 530 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 MCCD1P59942 119 aaPredicted RBP8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 PIGFQ07326 219 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 IL18R1Q13478 541 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 TIGD6Q17RP2 521 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 RAB41Q5JT25 222 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 ATAD3BQ5T9A4 648 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 FOXB2Q5VYV0 432 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 PSAPL1Q6NUJ1 521 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 RGMBQ6NW40 437 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 FAM171BQ6P995 826 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 SCD5Q86SK9 330 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 RAVER1Q8IY67 606 aaKnown RBP8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 MINDY2Q8NBR6 621 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 C2orf15Q8WU43 125 aaKnown RBP8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 PIH1D2Q8WWB5 315 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 TRUB1Q8WWH5 349 aaKnown RBP8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 TMEM125Q96AQ2 219 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 PHF21AQ96BD5 680 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 UBXN10Q96LJ8 280 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 CD244Q9BZW8 370 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 FAM118AQ9NWS6 357 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 CFAP97Q9P2B7 532 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 MAP4K5Q9Y4K4 846 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 ST14Q9Y5Y6 855 aa8.02□□□□□ -1.12
PRKAB1-207ENST00000542698 LDB2O43679 373 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 GLUD1P00367 558 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 IFNW1P05000 195 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 PRSS56P0CW18 603 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 CXCR2P25025 360 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 RPL10P27635 214 aaKnown RBP8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 HNF4AP41235 474 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 TAB1Q15750 504 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 C11orf91Q3C1V1 193 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 IFI44LQ53G44 452 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 NIPAL1Q6NVV3 410 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 RETREG3Q86VR2 466 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 RGL4Q8IZJ4 473 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 OR13J1Q8NGT2 312 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 GTPBP3Q969Y2 492 aaKnown RBP8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 OLAHQ9NV23 265 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 CPQQ9Y646 472 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 QSER1Q2KHR3 1735 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 LOXHD1Q8IVV2 1947 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 CCDC182A6NF36 153 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 DNAJB5O75953 348 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 POP4O95707 220 aaKnown RBP8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 RPN2P04844 631 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 CHRM1P11229 460 aaPredicted RBP8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 IMPDH2P12268 514 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 ARRB2P32121 409 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 CLCN4P51793 760 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 PTCHD3Q3KNS1 767 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 GCNT6Q5T4J0 391 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 GPR65Q8IYL9 337 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 C3orf58Q8NDZ4 430 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 C1GALT1C1Q96EU7 318 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 ZNF607Q96SK3 696 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 SMAD5Q99717 465 aaKnown RBP8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 CORO1BQ9BR76 489 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 C11orf84Q9BUA3 381 aaPredicted RBP8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 OSBPL10Q9BXB5 764 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 SLC29A3Q9BZD2 475 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 CSNK1G1Q9HCP0 422 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 FAIMQ9NVQ4 179 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 TOR4AQ9NXH8 423 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 CD84Q9UIB8 345 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 PCTPQ9UKL6 214 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 ASF1AQ9Y294 204 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 SLC9A8Q9Y2E8 581 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 CNTRLQ7Z7A1 2325 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms