RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 OR56A3Q8NH54 315 aa23.84■■□□□ 1.41
TTC3-225ENST00000540756 OR1E3Q8WZA6 343 aa23.84■■□□□ 1.41
TTC3-225ENST00000540756 GPR174Q9BXC1 333 aa23.84■■□□□ 1.41
TTC3-225ENST00000540756 TRPS1Q9UHF7 1281 aa23.84■■□□□ 1.41
TTC3-225ENST00000540756 KCNE1BA0A087WTH5 132 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 IGLV3-19P01714 112 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 LBPP18428 481 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 CPOXP36551 454 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 MAPK9P45984 424 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 TSTA3Q13630 321 aaPredicted RBP23.83■■□□□ 1.41
TTC3-225ENST00000540756 TTC23LQ6PF05 361 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 EFL1Q7Z2Z2 1120 aaKnown RBP23.83■■□□□ 1.41
TTC3-225ENST00000540756 SYTL1Q8IYJ3 562 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 ATL1Q8WXF7 558 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 C1orf50Q9BV19 199 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 CARS2Q9HA77 564 aaKnown RBP23.83■■□□□ 1.41
TTC3-225ENST00000540756 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.83■■□□□ 1.41
TTC3-225ENST00000540756 TDRKHQ9Y2W6 561 aaKnown RBP23.83■■□□□ 1.41
TTC3-225ENST00000540756 SLCO1B1Q9Y6L6 691 aa23.83■■□□□ 1.41
TTC3-225ENST00000540756 PRSS38A1L453 326 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 A8MUI8 341 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 E7EQ34 232 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 GSC2O15499 205 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 CD22P20273 847 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 NEK2P51955 445 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 CDC16Q13042 620 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 PAOXQ6QHF9 649 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 SUSD1Q6UWL2 747 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 RD3Q7Z3Z2 195 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 DENND6BQ8NEG7 585 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 MAFAQ8NHW3 353 aaPredicted RBP23.83■■□□□ 1.4
TTC3-225ENST00000540756 TSACCQ96A04 125 aaPredicted RBP23.83■■□□□ 1.4
TTC3-225ENST00000540756 CCDC167Q9P0B6 97 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 SH2B3Q9UQQ2 575 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 MRPS17Q9Y2R5 130 aaKnown RBP23.83■■□□□ 1.4
TTC3-225ENST00000540756 CCL27Q9Y4X3 112 aa23.83■■□□□ 1.4
TTC3-225ENST00000540756 C9JVG2 144 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 MANBAO00462 879 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 TBPL1P62380 186 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 MXRA7P84157 204 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 HMGCS1Q01581 520 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 CHIT1Q13231 466 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 SQLEQ14534 574 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 UNC5DQ6UXZ4 953 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 BIRC7Q96CA5 298 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 SCARF2Q96GP6 870 aaPredicted RBP23.82■■□□□ 1.4
TTC3-225ENST00000540756 WSB2Q9NYS7 404 aaPredicted RBP23.82■■□□□ 1.4
TTC3-225ENST00000540756 ZNF490Q9ULM2 529 aaPredicted RBP23.82■■□□□ 1.4
TTC3-225ENST00000540756 PCM1Q15154 2024 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 LAMA1P25391 3075 aa23.82■■□□□ 1.4
TTC3-225ENST00000540756 HALP42357 657 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 DMPKQ09013 629 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 PTK2BQ14289 1009 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 NFATC4Q14934 902 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 HABP4Q5JVS0 413 aaKnown RBP23.81■■□□□ 1.4
TTC3-225ENST00000540756 C6orf136Q5SQH8 315 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 FBXW10Q5XX13 1052 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 LRRC56Q8IYG6 542 aaPredicted RBP23.81■■□□□ 1.4
TTC3-225ENST00000540756 RNF175Q8N4F7 328 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 TMEM145Q8NBT3 493 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 INSM2Q96T92 566 aaPredicted RBP23.81■■□□□ 1.4
TTC3-225ENST00000540756 TIMM29Q9BSF4 260 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 RMI1Q9H9A7 625 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 PRR19A6NJB7 356 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 PSMD12O00232 456 aaPredicted RBP23.81■■□□□ 1.4
TTC3-225ENST00000540756 ULK1O75385 1050 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 WFS1O76024 890 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 SLC35G4P0C7Q5 338 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 PRDX6P30041 224 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 MAGEA9P43362 315 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 CCR3P51677 355 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 KIAA1024LP59773 190 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 ELF3P78545 371 aaPredicted RBP23.81■■□□□ 1.4
TTC3-225ENST00000540756 CUL3Q13618 768 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 CYLC2Q14093 348 aaPredicted RBP23.81■■□□□ 1.4
TTC3-225ENST00000540756 CLCA4Q14CN2 919 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 AGKQ53H12 422 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 CAPRIN2Q6IMN6 1127 aaKnown RBP23.81■■□□□ 1.4
TTC3-225ENST00000540756 TBC1D17Q9HA65 648 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 PRDM8Q9NQV8 689 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 INVSQ9Y283 1065 aa23.81■■□□□ 1.4
TTC3-225ENST00000540756 PRAMEF33A0A0G2JMD5 474 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 E7ENX8 843 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 STK25O00506 426 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 LSM1O15116 133 aaKnown RBP23.8■■□□□ 1.4
TTC3-225ENST00000540756 PDYNP01213 254 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 GPX3P22352 226 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 TAP2Q03519 686 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 ZRSR2Q15696 482 aaKnown RBP23.8■■□□□ 1.4
TTC3-225ENST00000540756 KIF19Q2TAC6 998 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 KIAA0895LQ68EN5 471 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 FUNDC1Q8IVP5 155 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 DEFB119Q8N690 84 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 L3MBTL4Q8NA19 623 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 OR5K2Q8NHB8 316 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 CCL4L1Q8NHW4 92 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 CLPTM1LQ96KA5 538 aa23.8■■□□□ 1.4
TTC3-225ENST00000540756 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.8■■□□□ 1.4
TTC3-225ENST00000540756 OR52A4PA6NMU1 304 aa23.79■■□□□ 1.4
TTC3-225ENST00000540756 IFRD1O00458 451 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms