RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 FLNBO75369 2602 aaKnown RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 USP27XA6NNY8 438 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 DNALI1O14645 258 aaPredicted RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 ZNF749O43361 778 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 OR2B3O76000 313 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 C1orf105O95561 183 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 AGXTP21549 392 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 MAGEA3P43357 314 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 RNASEH2BQ5TBB1 312 aaKnown RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 PRAMEF17Q5VTA0 474 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 IZUMO3Q5VZ72 239 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 CNSTQ6PJW8 725 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 CENPUQ71F23 418 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 SYVN1Q86TM6 617 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 PTRH1Q86Y79 214 aaKnown RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 ZBTB2Q8N680 514 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 SLC38A9Q8NBW4 561 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 FLVCR1-AS1Q8TAF5 88 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 C9orf43Q8TAL5 461 aaPredicted RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 SLCO2A1Q92959 643 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 TRIM44Q96DX7 344 aaPredicted RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 CAPZA3Q96KX2 299 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 SIGLEC10Q96LC7 697 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 RUNDC3BQ96NL0 473 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 IL17FQ96PD4 163 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 NAPGQ99747 312 aaPredicted RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 DPH2Q9BQC3 489 aaPredicted RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 TRIM56Q9BRZ2 755 aaKnown RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 CHST8Q9H2A9 424 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 FAM60AQ9NP50 221 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 C20orf96Q9NUD7 363 aaPredicted RBP16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 IL1RAPL1Q9NZN1 696 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 PCYOX1Q9UHG3 505 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 PYCARDQ9ULZ3 195 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 PLCL2Q9UPR0 1127 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 SAR1BQ9Y6B6 198 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 SEC16AO15027 2179 aa16.54■□□□□ 0.24
CACNA2D4-211ENST00000540728 MYO18BQ8IUG5 2567 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 ZCWPW2A0A1B0GU75 182 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 FKBP9O95302 570 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 RAB40ALP0C0E4 278 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 PEBP1P30086 187 aaKnown RBP16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 PAFAH1B1P43034 410 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 CTBP1Q13363 440 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 PTK6Q13882 451 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 GRB7Q14451 532 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 SF1Q15637 639 aaKnown RBP16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 ZIC1Q15915 447 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 DEFB110Q30KQ9 67 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 TTLL9Q3SXZ7 439 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 ZNF789Q5FWF6 425 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 PAPD7Q5XG87 772 aaKnown RBP16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 ZNF517Q6ZMY9 492 aaPredicted RBP16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 SYDE1Q6ZW31 735 aaPredicted RBP16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 TAX1BP1Q86VP1 789 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 SYTL1Q8IYJ3 562 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 C2orf73Q8N5S3 287 aaPredicted RBP16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 LINC01555Q8NAE3 123 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 FAM136AQ96C01 138 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 FAM167BQ9BTA0 163 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 MENTQ9BUN1 341 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 ZNF71Q9NQZ8 489 aaPredicted RBP16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 PCMTD2Q9NV79 361 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 TSR3Q9UJK0 312 aaKnown RBP16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 SNX7Q9UNH6 387 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 KCNMB2Q9Y691 235 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 NFS1Q9Y697 457 aa16.53■□□□□ 0.24
CACNA2D4-211ENST00000540728 ASH1LQ9NR48 2969 aaKnown RBP16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 C9J4A7 227 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 TTC4O95801 387 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 PGAM1P18669 254 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 MAGP20916 626 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 RORAP35398 523 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 BDKRB1P46663 353 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 RPS18P62269 152 aaKnown RBP16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 TLDC1Q6P9B6 456 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 DENND6AQ8IWF6 608 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 DNAJC22Q8N4W6 341 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 THAP4Q8WY91 577 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 RUFY1Q96T51 708 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 C17orf62Q9BQA9 187 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 NAT9Q9BTE0 207 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 NLNQ9BYT8 704 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 FBXO6Q9NRD1 293 aaPredicted RBP16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 FAM114A2Q9NRY5 505 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 TXLNGQ9NUQ3 528 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 SPATA7Q9P0W8 599 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 SRPK3Q9UPE1 567 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 RUVBL2Q9Y230 463 aaKnown RBP16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 MAN2B2Q9Y2E5 1009 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 COMMD10Q9Y6G5 202 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 FAM169AQ9Y6X4 670 aa16.52■□□□□ 0.24
CACNA2D4-211ENST00000540728 SNRNP200O75643 2136 aaKnown RBP16.52■□□□□ 0.23
CACNA2D4-211ENST00000540728 MKRN2OSH3BPM6 223 aa16.51■□□□□ 0.23
CACNA2D4-211ENST00000540728 ZSCAN9O15535 394 aaPredicted RBP16.51■□□□□ 0.23
CACNA2D4-211ENST00000540728 MATN4O95460 622 aa16.51■□□□□ 0.23
CACNA2D4-211ENST00000540728 CATP04040 527 aaKnown RBP16.51■□□□□ 0.23
CACNA2D4-211ENST00000540728 FURINP09958 794 aa16.51■□□□□ 0.23
CACNA2D4-211ENST00000540728 SLC1A2P43004 574 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms