RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 B3GALT6Q96L58 329 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 CDK5RAP1Q96SZ6 601 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 EGFL8Q99944 293 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 SLC29A3Q9BZD2 475 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 NACA2Q9H009 215 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 RMND5AQ9H871 391 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 DNMT3BQ9UBC3 853 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 PRG3Q9Y2Y8 225 aaPredicted RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 A0A0U1RQS6 177 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 MTMR11A4FU01 709 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 LOC730098B7Z3J9 87 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 GPR39O43194 453 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 CCNDBP1O95273 360 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 VNN2O95498 520 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 PCSK2P16519 638 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 PTPN6P29350 595 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 HMGCLP35914 325 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 GGT5P36269 586 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ST13P50502 369 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 ARPP19P56211 112 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 RPS14P62263 151 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 MVKQ03426 396 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 CD300CQ08708 224 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 GPR17Q13304 367 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 SIM2Q14190 667 aaPredicted RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 PHKG1Q16816 387 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 TTLL9Q3SXZ7 439 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 SGO1Q5FBB7 561 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 OR2T5Q6IEZ7 315 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 SNX20Q7Z614 316 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 GALNT5Q7Z7M9 940 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ADCK1Q86TW2 530 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 SERPINA9Q86WD7 417 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 FAM9CQ8IZT9 166 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 PGBD3Q8N328 593 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 OR2T29Q8NH02 315 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 EID2BQ96D98 161 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 APOL4Q9BPW4 351 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 HEPHQ9BQS7 1158 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 BTBD2Q9BX70 525 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ASPSCR1Q9BZE9 553 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 GPR63Q9BZJ6 419 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 CRISPLD1Q9H336 500 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 SPC25Q9HBM1 224 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ANKHQ9HCJ1 492 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 TM9SF3Q9HD45 589 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 CCNB1IP1Q9NPC3 277 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 IL1RAPQ9NPH3 570 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 WWOXQ9NZC7 414 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 SAMD4AQ9UPU9 718 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 NOD1Q9Y239 953 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 HTR3EA5X5Y0 456 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 FZD6O60353 706 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 MAN1A2O60476 641 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 SLC25A14O95258 325 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 CD160O95971 181 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 KRT6AP02538 564 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 MT-ND2P03891 347 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 KRT6BP04259 564 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 PRPS2P11908 318 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 MYCLP1P12525 358 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 EPB42P16452 691 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 KRT6CP48668 564 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 MASP1P48740 699 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 ARHGDIAP52565 204 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 VBP1P61758 197 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 NKX3-2P78367 333 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 FAM189BP81408 668 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 ARF5P84085 180 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 FADDQ13158 208 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 FAM171A1Q5VUB5 890 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 RNF219Q5W0B1 726 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 LAIR1Q6GTX8 287 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 PLEKHG7Q6ZR37 379 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 CEP68Q76N32 757 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 TSPYL5Q86VY4 417 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 RBFAQ8N0V3 343 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 SOCS4Q8WXH5 440 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 ULK4Q96C45 1275 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 SEPT5Q99719 369 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 BARD1Q99728 777 aaKnown RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 INPP5KQ9BT40 448 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 TTLL2Q9BWV7 592 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 ALOXE3Q9BYJ1 711 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 RIBC2Q9H4K1 309 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 RDH14Q9HBH5 336 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 FAM32AQ9Y421 112 aaKnown RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 GMPPBQ9Y5P6 360 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 A0A1B0GVM2 712 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 SLC38A8A6NNN8 435 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 TTC34A8MYJ7 566 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 RGS10O43665 173 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 CLDN9O95484 217 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 PRAMEF12O95522 483 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 ITGB6P18564 788 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 FUT4P22083 530 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 DNAJA1P31689 397 aaKnown RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 LSM3P62310 102 aaKnown RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 MAD2L1BPQ15013 274 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms