RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CDK2AP2O75956 126 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 TMEM63AO94886 807 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 DDX58O95786 925 aaKnown RBP3.97□□□□□ -1.77
CCDC7-209ENST00000539197 IGHEP01854 428 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 MELTFP08582 738 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 GP9P14770 177 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 MMP9P14780 707 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 GABRA5P31644 462 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 MTHFRP42898 656 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 ZFP36L2P47974 494 aaKnown RBP3.97□□□□□ -1.77
CCDC7-209ENST00000539197 FIGLAQ6QHK4 219 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 FRRS1Q6ZNA5 592 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 TMTC3Q6ZXV5 915 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 METTL4Q8N3J2 472 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 WDTC1Q8N5D0 677 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 PAPD5Q8NDF8 572 aaKnown RBP3.97□□□□□ -1.77
CCDC7-209ENST00000539197 NPEPL1Q8NDH3 523 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 OR1L3Q8NH93 324 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 GATAD1Q8WUU5 269 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 LMF2Q9BU23 707 aaKnown RBP3.97□□□□□ -1.77
CCDC7-209ENST00000539197 MUC13Q9H3R2 512 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 DIAPH3Q9NSV4 1193 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 B3GAT1Q9P2W7 334 aa3.97□□□□□ -1.77
CCDC7-209ENST00000539197 LOC105371242A0A075B767 164 aa3.96□□□□□ -1.78
CCDC7-209ENST00000539197 A8MXK9 166 aa3.96□□□□□ -1.78
CCDC7-209ENST00000539197 HOXD4P09016 255 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-209ENST00000539197 SLC2A2P11168 524 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-209ENST00000539197 LBX1P52954 281 aa3.96□□□□□ -1.78
CCDC7-209ENST00000539197 LCN1P1Q5VSP4 162 aa3.96□□□□□ -1.78
CCDC7-209ENST00000539197 TMEM154Q6P9G4 183 aa3.96□□□□□ -1.78
CCDC7-209ENST00000539197 AACSQ86V21 672 aa3.96□□□□□ -1.78
CCDC7-209ENST00000539197 SEC62Q99442 399 aaKnown RBP3.96□□□□□ -1.78
CCDC7-209ENST00000539197 NKX3-1Q99801 234 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-209ENST00000539197 FAM49AQ9H0Q0 323 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-209ENST00000539197 GRIP1Q9Y3R0 1128 aa3.96□□□□□ -1.78
CCDC7-209ENST00000539197 CLTBP09497 229 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 DARSP14868 501 aaKnown RBP3.95□□□□□ -1.78
CCDC7-209ENST00000539197 CAPGP40121 348 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 KRTAP10-1P60331 282 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 DLK1P80370 383 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 TAF10Q12962 218 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 FAM166AQ6J272 317 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 IKBIPQ70UQ0 350 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 CCDC107Q8WV48 283 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 PGAM5Q96HS1 289 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 CEP295NLQ96MC4 621 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 TDRD1Q9BXT4 1180 aaKnown RBP3.95□□□□□ -1.78
CCDC7-209ENST00000539197 MIS12Q9H081 205 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 LARSQ9P2J5 1176 aaKnown RBP3.95□□□□□ -1.78
CCDC7-209ENST00000539197 CTSZQ9UBR2 303 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 RUSC2Q8N2Y8 1516 aa3.95□□□□□ -1.78
CCDC7-209ENST00000539197 HCFC1P51610 2035 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 MYO1GB0I1T2 1018 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 NPHP1O15259 732 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 GPRIN2O60269 458 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 OR10H2O60403 315 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 CDH3P22223 829 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 CDH8P55286 799 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 ZNF415Q09FC8 603 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 EFTUD2Q15029 972 aaKnown RBP eCLIP3.94□□□□□ -1.78
CCDC7-209ENST00000539197 GORABQ5T7V8 394 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 CES4AQ5XG92 561 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 NOTUMQ6P988 496 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 CHST9Q7L1S5 443 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 G2E3Q7L622 706 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 SLC25A42Q86VD7 318 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 GPD1LQ8N335 351 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 PCYOX1LQ8NBM8 494 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 TDRD7Q8NHU6 1098 aaKnown RBP3.94□□□□□ -1.78
CCDC7-209ENST00000539197 ITPAQ9BY32 194 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 HEXA-AS1Q9H8Q6 139 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 B3GAT2Q9NPZ5 323 aa3.94□□□□□ -1.78
CCDC7-209ENST00000539197 C9orf78Q9NZ63 289 aaPredicted RBP3.94□□□□□ -1.78
CCDC7-209ENST00000539197 SHISA7A6NL88 538 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 TFECO14948 347 aaPredicted RBP3.93□□□□□ -1.78
CCDC7-209ENST00000539197 LRCH4O75427 683 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 RB1P06400 928 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 HSPA8P11142 646 aaKnown RBP3.93□□□□□ -1.78
CCDC7-209ENST00000539197 ETV5P41161 510 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 CRYMQ14894 314 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 NR1D2Q14995 579 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 TMEM95Q3KNT9 176 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 ZNF841Q6ZN19 808 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 GDPGP1Q6ZNW5 385 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 TMPRSS11FQ6ZWK6 438 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 FGFRL1Q8N441 504 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 AFAP1Q8N556 730 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 NPRL2Q8WTW4 380 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 APOBEC4Q8WW27 367 aaKnown RBP3.93□□□□□ -1.78
CCDC7-209ENST00000539197 RFT1Q96AA3 541 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 ATXN7L3BQ96GX2 97 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 TBATAQ96M53 351 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 C1orf147Q96MC9 270 aaPredicted RBP3.93□□□□□ -1.78
CCDC7-209ENST00000539197 LGMNQ99538 433 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 HACL1Q9UJ83 578 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 TMEM98Q9Y2Y6 226 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 PCDH11YQ9BZA8 1340 aa3.93□□□□□ -1.78
CCDC7-209ENST00000539197 ENO4A6NNW6 628 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms