RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 NFKBIL1Q9UBC1 381 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-205ENST00000538545 CA5BQ9Y2D0 317 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 PLEKHM1Q9Y4G2 1056 aa13.74□□□□□ -0.21
ACTN1-205ENST00000538545 ARHGAP10A1A4S6 786 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 ACOT8O14734 319 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 PSIP1O75475 530 aaKnown RBP13.73□□□□□ -0.21
ACTN1-205ENST00000538545 PEX2P28328 305 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 ATP4BP51164 291 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 RCAN2Q14206 197 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 MUM1Q2TAK8 710 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 CYP2U1Q7Z449 544 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 THOC6Q86W42 341 aaKnown RBP13.73□□□□□ -0.21
ACTN1-205ENST00000538545 APIPQ96GX9 242 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 PPM1MQ96MI6 270 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 TSSK3Q96PN8 268 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 SERPINI1Q99574 410 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 TRIM39Q9HCM9 518 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 NDE1Q9NXR1 346 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 WDR87Q6ZQQ6 2873 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 CCDC154A6NI56 674 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 C1QCP02747 245 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 NFYCQ13952 458 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 GSTA3Q16772 222 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 TMEM52BQ4KMG9 183 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 XKR6Q5GH73 641 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 CATSPEREQ5SY80 951 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 PNCKQ6P2M8 343 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 CHRDL2Q6WN34 429 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 SPATA19Q7Z5L4 167 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 DSG4Q86SJ6 1040 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 SLC15A3Q8IY34 581 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 SYTL1Q8IYJ3 562 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 KIAA2013Q8IYS2 634 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 IL17RCQ8NAC3 791 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 LRRC58Q96CX6 371 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 BRINP2Q9C0B6 783 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 ELOVL6Q9H5J4 265 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 COPS7BQ9H9Q2 264 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-205ENST00000538545 DNAJC11Q9NVH1 559 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 MOSPD1Q9UJG1 213 aa13.73□□□□□ -0.21
ACTN1-205ENST00000538545 ANKRD28O15084 1053 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 NVLO15381 856 aaKnown RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 SLC31A1O15431 190 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 NCK1P16333 377 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 SLC6A2P23975 617 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 CTHP32929 405 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 IRF8Q02556 426 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 SELPLGQ14242 412 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 CCDC85BQ15834 202 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 ZNF658BQ4V348 819 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 C6orf10Q5SRN2 563 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 RALGPS2Q86X27 583 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 FLCNQ8NFG4 579 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 OR5AR1Q8NGP9 310 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 CSGALNACT1Q8TDX6 532 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 ZNF480Q8WV37 535 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 HIC2Q96JB3 615 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 RSPH9Q9H1X1 276 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 LIMD1Q9UGP4 676 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 TDRKHQ9Y2W6 561 aaKnown RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 KCNE1BA0A087WTH5 132 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 TRIM38O00635 465 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 C1orf105O95561 183 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 EFNA1P20827 205 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 VHLP40337 213 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 CDK3Q00526 305 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 HTR4Q13639 388 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 C8orf82Q6P1X6 216 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 CHST15Q7LFX5 561 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 LILRA2Q8N149 483 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 CDC26Q8NHZ8 85 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 HDAC8Q9BY41 377 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 TTYH1Q9H313 450 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 LRTM1Q9HBL6 345 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 TMEM181Q9P2C4 612 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 V9GYQ6 96 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 DENND4AQ7Z401 1863 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 PRAMEF33A0A0G2JMD5 474 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 A0A1W2PP18 115 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 VPS4BO75351 444 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 ETHE1O95571 254 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 MTHFD1P11586 935 aaKnown RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 MTPNP58546 118 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 RPS14P62263 151 aaKnown RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 EMX2Q04743 252 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 CAMK2GQ13555 558 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 DOC2AQ14183 400 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 IRF4Q15306 451 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 TLR1Q15399 786 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 FAM174BQ3ZCQ3 159 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 GTDC1Q4AE62 458 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 SPANXN4Q5MJ08 99 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 ISLR2Q6UXK2 745 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 EFL1Q7Z2Z2 1120 aaKnown RBP13.72□□□□□ -0.21
ACTN1-205ENST00000538545 ANKRD46Q86W74 232 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 GLMNQ92990 594 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 USP7Q93009 1102 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 NEIL2Q969S2 332 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 APOLD1Q96LR9 279 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms