RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MTX3Q5HYI7 312 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 RSBN1Q5VWQ0 802 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 TRAF7Q6Q0C0 670 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 NUP54Q7Z3B4 507 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 HIPK1Q86Z02 1210 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ZNF483Q8TF39 744 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 WDR92Q96MX6 357 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 RTKNQ9BST9 563 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 METTL7AQ9H8H3 244 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 APOBEC3BQ9UH17 382 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 UTS2RQ9UKP6 389 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 MYOCOSA0A1B0GUC4 107 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ENO4A6NNW6 628 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 WWP2O00308 870 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 TIPRLO75663 272 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 SRPRAP08240 638 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 CDH1P12830 882 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 RPS14P62263 151 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 MEF2AQ02078 507 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 RAB33AQ14088 237 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ELOAQ14241 798 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 SMARCD3Q6STE5 483 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 TMEM139Q8IV31 216 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ZHX1-C8orf76Q96EF9 292 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ZDHHC12Q96GR4 267 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 PIWIL1Q96J94 861 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 DNAAF2Q9NVR5 837 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 ELOVL7A1L3X0 281 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CENPXA8MT69 81 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 PTGESO14684 152 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 GBAP04062 536 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 GALNT2Q10471 571 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 DCAF12L1Q5VU92 463 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CLVS1Q8IUQ0 354 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 FAM81AQ8TBF8 368 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 SCAMP4Q969E2 229 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 MYDGFQ969H8 173 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CMTM7Q96FZ5 175 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 HOPXQ9BPY8 73 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 HAPLN2Q9GZV7 340 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 PRDM8Q9NQV8 689 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ITM2CQ9NQX7 267 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 FNIP2Q9P278 1114 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 HCSTQ9UBK5 93 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 OR1A2Q9Y585 309 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 A0A1W2PRB8 838 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 C2orf74A8MZ97 194 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 hCG_2039718K7EN88 272 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 K7ERQ8 282 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 SIX3O95343 332 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 SEMA4FO95754 770 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 GSRP00390 522 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CBSLP0DN79 551 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CBSP35520 551 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 GDF5P43026 501 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 HADHBP55084 474 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 PITX1P78337 314 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 HMGCS1Q01581 520 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 KLF10Q13118 480 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 DCST1Q5T197 706 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ERICH5Q6P6B1 374 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 FBXW8Q8N3Y1 598 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CMASQ8NFW8 434 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 LRRC15Q8TF66 581 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 TSEN15Q8WW01 171 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 TMEM125Q96AQ2 219 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 MMABQ96EY8 250 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 C1orf74Q96LT6 269 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 DCUN1D5Q9BTE7 237 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 DUSP26Q9BV47 211 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 LINC00597Q9H2U6 94 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 SLC32A1Q9H598 525 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ARHGEF3Q9NR81 526 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 TMLHEQ9NVH6 421 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CALML5Q9NZT1 146 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 DKKL1Q9UK85 242 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CNTN6Q9UQ52 1028 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 NHSL1Q5SYE7 1610 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 FAM170BA6NMN3 283 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 TNFRSF11BO00300 401 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 TNFRSF10BO14763 440 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 MFN2O95140 757 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 BCL10O95999 233 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ASGR2P07307 311 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 MYOGP15173 224 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 NCK1P16333 377 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CD70P32970 193 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 GRK6P43250 576 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CDKN1CP49918 316 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 SNAPC1Q16533 368 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 TRIM16LQ309B1 348 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 FAM174BQ3ZCQ3 159 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 RALGPS1Q5JS13 557 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 USP53Q70EK8 1073 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ZNF527Q8NB42 609 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 OR4K17Q8NGC6 315 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 OR10A6Q8NH74 314 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 SMPDL3AQ92484 453 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ZNF641Q96N77 438 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 ARL8BQ9NVJ2 186 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms