RNA–Protein interactions for RNA: ENST00000536852.1

MAP3K4-208, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 2

Gene MAP3K4, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-208	ENST00000536852	SLC44A4	Q53GD3	710 aa		11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	DGKK	Q5KSL6	1271 aa		11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	LRIF1	Q5T3J3	769 aa		11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	DUS1L	Q6P1R4	473 aa	Known RBP	11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852		Q6ZNB5	142 aa		11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	DET1	Q7L5Y6	550 aa		11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	CALHM3	Q86XJ0	350 aa		11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	CBARP	Q8N350	705 aa	Predicted RBP	11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	FRS2	Q8WU20	508 aa		11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	SNRNP27	Q8WVK2	155 aa	Known RBP	11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	SKA2	Q8WVK7	121 aa	Predicted RBP	11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	RMND5A	Q9H871	391 aa		11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	WARS2	Q9UGM6	360 aa	Known RBP	11.22	□□□□□ -0.61
MAP3K4-208	ENST00000536852	ANAPC1	Q9H1A4	1944 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	PER2	O15055	1255 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	BNIP3L	O60238	219 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	ARHGEF15	O94989	841 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	B3GALT4	O96024	378 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	HTR1A	P08908	422 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	TFPT	P0C1Z6	253 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	AGXT	P21549	392 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	TACR1	P25103	407 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	CCR7	P32248	378 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	CSNK1D	P48730	415 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	PLA2G16	P53816	162 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	C21orf59	P57076	290 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	CES5A	Q6NT32	575 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	CRTC1	Q6UUV9	634 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852		Q6ZNX1	250 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	UBE2R2	Q712K3	238 aa	Predicted RBP	11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	EGFL6	Q8IUX8	553 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	PLPP6	Q8IY26	295 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	RNF168	Q8IYW5	571 aa	Predicted RBP	11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	SMYD1	Q8NB12	490 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	GIPC3	Q8TF64	312 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	PYURF	Q96I23	114 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	COPS8	Q99627	209 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	BEGAIN	Q9BUH8	593 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	DNAAF2	Q9NVR5	837 aa	Known RBP	11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	ZDHHC3	Q9NYG2	299 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	PSME2	Q9UL46	239 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	CLEC4E	Q9ULY5	219 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	SNX6	Q9UNH7	406 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	MAN2B2	Q9Y2E5	1009 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	ORC6	Q9Y5N6	252 aa		11.21	□□□□□ -0.61
MAP3K4-208	ENST00000536852	AGAP14	A8MT82	685 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	ZNF821	O75541	412 aa	Predicted RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	LRAT	O95237	230 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	INHBB	P09529	407 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	PRPS2	P11908	318 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	CDKN2C	P42773	168 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	GZMM	P51124	257 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	HSPA14	Q0VDF9	509 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	LMAN2	Q12907	356 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	SPIDR	Q14159	915 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	MOG	Q16653	247 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	ATP13A5	Q4VNC0	1218 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	LRRC66	Q68CR7	880 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	GTF2IRD2B	Q6EKJ0	949 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	GTF2IRD2	Q86UP8	949 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	ARL10	Q8N8L6	244 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	PLEKHA8	Q96JA3	519 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	DGCR6L	Q9BY27	220 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	EXD2	Q9NVH0	621 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	TDRKH	Q9Y2W6	561 aa	Known RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	SNX5	Q9Y5X3	404 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	PTGES3L	E9PB15	166 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	INHA	P05111	366 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	PFKL	P17858	780 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	HOXD10	P28358	340 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	BMX	P51813	675 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	RAD23A	P54725	363 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	EPHB3	P54753	998 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	GABARAPL2	P60520	117 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	ISL1	P61371	349 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	B4GALNT1	Q00973	533 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	TOP3A	Q13472	1001 aa	Predicted RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	SPOUT1	Q5T280	376 aa	Known RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	LAIR2	Q6ISS4	152 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	LRRC70	Q7Z2Q7	622 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	HIPK1	Q86Z02	1210 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	DCP2	Q8IU60	420 aa	Known RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	SLC22A15	Q8IZD6	547 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	FAM9C	Q8IZT9	166 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	BEND7	Q8N7W2	519 aa	Predicted RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	NAT16	Q8N8M0	369 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	OR2AP1	Q8NGE2	309 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	CD99L2	Q8TCZ2	262 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	PYCR2	Q96C36	320 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	REXO5	Q96IC2	774 aa	Known RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	CSF3R	Q99062	836 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	HMX1	Q9NP08	348 aa	Predicted RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	FAIM	Q9NVQ4	179 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	LMCD1	Q9NZU5	365 aa		11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	LSM7	Q9UK45	103 aa	Known RBP	11.2	□□□□□ -0.62
MAP3K4-208	ENST00000536852	PPT2	Q9UMR5	302 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms