RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 PDLIM2Q96JY6 352 aa11.62□□□□□ -0.55
COPB1-206ENST00000529210 SIGLEC10Q96LC7 697 aa11.62□□□□□ -0.55
COPB1-206ENST00000529210 RUFY1Q96T51 708 aa11.62□□□□□ -0.55
COPB1-206ENST00000529210 C17orf62Q9BQA9 187 aa11.62□□□□□ -0.55
COPB1-206ENST00000529210 SAMD15Q9P1V8 674 aa11.62□□□□□ -0.55
COPB1-206ENST00000529210 PCYOX1Q9UHG3 505 aa11.62□□□□□ -0.55
COPB1-206ENST00000529210 ANAPC2Q9UJX6 822 aa11.62□□□□□ -0.55
COPB1-206ENST00000529210 SRPK3Q9UPE1 567 aa11.62□□□□□ -0.55
COPB1-206ENST00000529210 HEMK1Q9Y5R4 338 aaPredicted RBP11.62□□□□□ -0.55
COPB1-206ENST00000529210 UBR5O95071 2799 aaPredicted RBP11.62□□□□□ -0.55
COPB1-206ENST00000529210 ISM1B1AKI9 464 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 TARM1B6A8C7 271 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 ZNF749O43361 778 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 HCRTR1O43613 425 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 SLC28A2O43868 658 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 RFPL1O75677 317 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 ONECUT2O95948 504 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 CD63P08962 238 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 PKMP14618 531 aaKnown RBP11.61□□□□□ -0.55
COPB1-206ENST00000529210 TCP1P17987 556 aaKnown RBP11.61□□□□□ -0.55
COPB1-206ENST00000529210 CSE1LP55060 971 aaKnown RBP11.61□□□□□ -0.55
COPB1-206ENST00000529210 EIF3BP55884 814 aaKnown RBP11.61□□□□□ -0.55
COPB1-206ENST00000529210 IL10RAQ13651 578 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 DHX34Q14147 1143 aaKnown RBP11.61□□□□□ -0.55
COPB1-206ENST00000529210 RNASEH2BQ5TBB1 312 aaKnown RBP11.61□□□□□ -0.55
COPB1-206ENST00000529210 LCN10Q6JVE6 187 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 TLDC1Q6P9B6 456 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 TTC23LQ6PF05 361 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 NEK10Q6ZWH5 1172 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 TRIM73Q86UV7 250 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 PPIL6Q8IXY8 311 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 AGGF1Q8N302 714 aaeCLIP11.61□□□□□ -0.55
COPB1-206ENST00000529210 LMNTD1Q8N9Z9 388 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 GSDMBQ8TAX9 411 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 ZUFSPQ96AP4 578 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 CLIP3Q96DZ5 547 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 RNF31Q96EP0 1072 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 FOPNLQ96NB1 174 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 ZNF285Q96NJ3 590 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 GBP5Q96PP8 586 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 MLXIPLQ9NP71 852 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 INTS7Q9NVH2 962 aaKnown RBP11.61□□□□□ -0.55
COPB1-206ENST00000529210 SPATA7Q9P0W8 599 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 TCFL5Q9UL49 500 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 PLAGL1Q9UM63 463 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 PLCL2Q9UPR0 1127 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 COMMD10Q9Y6G5 202 aa11.61□□□□□ -0.55
COPB1-206ENST00000529210 CDC14CA4D256 554 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 GOLGA8KD6RF30 607 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 MKRN2OSH3BPM6 223 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 GOLGA8TH3BQL2 631 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 ZSCAN9O15535 394 aaPredicted RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 NIPSNAP2O75323 286 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 PSIP1O75475 530 aaKnown RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 OR2B3O76000 313 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 MAGP20916 626 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 FMO4P31512 558 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 CLCN7P51798 805 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 RPS18P62269 152 aaKnown RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 NCF4Q15080 339 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 CYP2A13Q16696 494 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 LACTB2Q53H82 288 aaPredicted RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 YOD1Q5VVQ6 348 aaPredicted RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 PAPD7Q5XG87 772 aaKnown RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 RAB42Q8N4Z0 105 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 ENDOVQ8N8Q3 282 aaKnown RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 FBXO15Q8NCQ5 510 aaPredicted RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 CALML6Q8TD86 181 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 DENND1AQ8TEH3 1009 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 KCNJ9Q92806 393 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 ZNF669Q96BR6 464 aaPredicted RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 KLHL25Q9H0H3 589 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 SLC39A10Q9ULF5 831 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 SNX7Q9UNH6 387 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 MAN2B2Q9Y2E5 1009 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 MED16Q9Y2X0 877 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 PCDHGA9Q9Y5G4 932 aaKnown RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 NFS1Q9Y697 457 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 FAM169AQ9Y6X4 670 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 ASH1LQ9NR48 2969 aaKnown RBP11.6□□□□□ -0.55
COPB1-206ENST00000529210 MYO18BQ8IUG5 2567 aa11.6□□□□□ -0.55
COPB1-206ENST00000529210 A0A1W2PPV9 198 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 FITM1A5D6W6 292 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 MYO1CO00159 1063 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 EIF3FO00303 357 aaPredicted RBP11.59□□□□□ -0.55
COPB1-206ENST00000529210 DNALI1O14645 258 aaPredicted RBP11.59□□□□□ -0.55
COPB1-206ENST00000529210 KLF7O75840 302 aaPredicted RBP11.59□□□□□ -0.55
COPB1-206ENST00000529210 CEACAM4O75871 244 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 WISP1O95388 367 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 AGXTP21549 392 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 IVDP26440 423 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 CASRP41180 1078 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 CSRP3P50461 194 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 ARSFP54793 590 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 PTK6Q13882 451 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 ARHGAP19Q14CB8 494 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 NAA25Q14CX7 972 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 LONRF1Q17RB8 773 aa11.59□□□□□ -0.55
COPB1-206ENST00000529210 KCTD19Q17RG1 926 aaPredicted RBP11.59□□□□□ -0.55
COPB1-206ENST00000529210 ZC3H12BQ5HYM0 836 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms