RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TCTN2Q96GX1 697 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 CRELD1Q96HD1 420 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 IL17FQ96PD4 163 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 PITPNM3Q9BZ71 974 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 SLC7A5P2Q9GIP4 190 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 GPN2Q9H9Y4 310 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-215ENST00000528396 SYTL2Q9HCH5 934 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 INTS7Q9NVH2 962 aaKnown RBP12.94□□□□□ -0.34
CAPN1-215ENST00000528396 NSMCE4AQ9NXX6 385 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 SPHK1Q9NYA1 384 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 GALPQ9UBC7 116 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 PILRAQ9UKJ1 303 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 CORO1CQ9ULV4 474 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-215ENST00000528396 BTRCQ9Y297 605 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 DHRS7Q9Y394 339 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 IGSF10Q6WRI0 2623 aa12.94□□□□□ -0.34
CAPN1-215ENST00000528396 ZNF839A8K0R7 811 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 TMEM150CB9EJG8 249 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 E7ESA3 106 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 EIF3FO00303 357 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-215ENST00000528396 SCRG1O75711 98 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 MATN4O95460 622 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 AHSGP02765 367 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 TPBGLP0DKB5 382 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 CYP2A7P20853 494 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 SAT1P21673 171 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 SLC7A5Q01650 507 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 PDAP1Q13442 181 aaKnown RBP12.93□□□□□ -0.34
CAPN1-215ENST00000528396 TEDDM1Q5T9Z0 273 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 GALNT7Q86SF2 657 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 CPNE9Q8IYJ1 553 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 GPR135Q8IZ08 494 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 MYO1HQ8N1T3 1032 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 C19orf47Q8N9M1 422 aaKnown RBP12.93□□□□□ -0.34
CAPN1-215ENST00000528396 GALNT6Q8NCL4 622 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 CD200R1Q8TD46 325 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 FCRL4Q96PJ5 515 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 TRAPPC9Q96Q05 1148 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 OR2A14Q96R47 310 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 EFHD1Q9BUP0 239 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 GRHL1Q9NZI5 618 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 SPATA7Q9P0W8 599 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 SLC17A6Q9P2U8 582 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 SERTAD3Q9UJW9 196 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 TMEM184BQ9Y519 407 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-215ENST00000528396 ADAMTS20P59510 1910 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 SDK2Q58EX2 2172 aa12.93□□□□□ -0.34
CAPN1-215ENST00000528396 NBEAQ8NFP9 2946 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 FASNP49327 2511 aaKnown RBP12.92□□□□□ -0.34
CAPN1-215ENST00000528396 TP73O15350 636 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 ZBTB14O43829 449 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 PSIP1O75475 530 aaKnown RBP12.92□□□□□ -0.34
CAPN1-215ENST00000528396 MPC1LP0DKB6 136 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 HSD17B2P37059 387 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 GUCY2DQ02846 1103 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 ILF2Q12905 390 aaKnown RBP12.92□□□□□ -0.34
CAPN1-215ENST00000528396 MAP7Q14244 749 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 GBX1Q14549 363 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 PWWP2BQ6NUJ5 590 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 CEP128Q6ZU80 1094 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 STRA8Q7Z7C7 330 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 LINC01555Q8NAE3 123 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 OR9A1PQ8NGU1 263 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 GIMAP7Q8NHV1 300 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 FBXO25Q8TCJ0 367 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 SLC30A3Q99726 388 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 WDR83Q9BRX9 315 aaKnown RBP12.92□□□□□ -0.34
CAPN1-215ENST00000528396 LRRC1Q9BTT6 524 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 PRORYQ9H606 182 aa12.92□□□□□ -0.34
CAPN1-215ENST00000528396 TEX51A0A1B0GUA7 166 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 ESYT3A0FGR9 886 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 ARHGEF33A8MVX0 844 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 K7ENP7 123 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 EFSO43281 561 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 CPNE3O75131 537 aaKnown RBP12.91□□□□□ -0.34
CAPN1-215ENST00000528396 FKBP9O95302 570 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 DLGAP3O95886 979 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 NTRK1P04629 796 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 ZNF28P17035 718 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 OAS2P29728 719 aaKnown RBP12.91□□□□□ -0.34
CAPN1-215ENST00000528396 RPA3P35244 121 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-215ENST00000528396 SLC12A2P55011 1212 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 CDKN2DP55273 166 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 ITGA1P56199 1179 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 IL2P60568 153 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 ABHD18Q0P651 414 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 GRB7Q14451 532 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 NAA25Q14CX7 972 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 CCSMST1Q4G0I0 132 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 RBM20Q5T481 1227 aaKnown RBP12.91□□□□□ -0.34
CAPN1-215ENST00000528396 HECTD2Q5U5R9 776 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 FAM45BPQ6NSW5 357 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-215ENST00000528396 CDHR3Q6ZTQ4 885 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 UBE2R2Q712K3 238 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-215ENST00000528396 PIWIL4Q7Z3Z4 852 aaKnown RBP12.91□□□□□ -0.34
CAPN1-215ENST00000528396 SLC26A11Q86WA9 606 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 CEP112Q8N8E3 955 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 FAM45AQ8TCE6 357 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 MCOLN3Q8TDD5 553 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms