RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 NPTX1Q15818 432 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 LACTB2Q53H82 288 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 LRRC73Q5JTD7 316 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 CASC4Q6P4E1 433 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 EXOC3L1Q86VI1 746 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 FOXP4Q8IVH2 680 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 APCDD1Q8J025 514 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 HDDC3Q8N4P3 179 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 MRPL43Q8N983 215 aaKnown RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 OR14A16Q8NHC5 309 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 RNASE8Q8TDE3 154 aaKnown RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 SLC38A5Q8WUX1 472 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 DAZLQ92904 295 aaKnown RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 MTERF3Q96E29 417 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 C5orf30Q96GV9 206 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 TXNDC15Q96J42 360 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 TSGA13Q96PP4 275 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 KLHL5Q96PQ7 755 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 PRAM1Q96QH2 718 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 GAL3ST4Q96RP7 486 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 PKP4Q99569 1192 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 NTPCRQ9BSD7 190 aaKnown RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 P2RY12Q9H244 342 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 C1orf21Q9H246 121 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 HSD3B7Q9H2F3 369 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 ARRDC1-AS1Q9H2J1 176 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 Q9H8V8 135 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 SERINC1Q9NRX5 453 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 ZNF701Q9NV72 531 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 HPF1Q9NWY4 346 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 COMMD8Q9NX08 183 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 NINJ2Q9NZG7 142 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 B3GAT1Q9P2W7 334 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 MTUS1Q9ULD2 1270 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 GPR132Q9UNW8 380 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 DHX29Q7Z478 1369 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PCDH11YQ9BZA8 1340 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 TEX13DA0A0J9YY54 714 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 A0A1B0GVT2 93 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 MAGEA13PA6NCF6 341 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 KRT87PA6NCN2 255 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 CASTOR2A6NHX0 329 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 OR6C75A6NL08 312 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PRR32B1ATL7 298 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 MID1O15344 667 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 FLRT2O43155 660 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 LETM1O95202 739 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 SMIM18P0DKX4 95 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 HAPLN1P10915 354 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 GM2AP17900 193 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 EPORP19235 508 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 HOXA11P31270 313 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 ARRB2P32121 409 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 HSD17B3P37058 310 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 CASP9P55211 416 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 UCP2P55851 309 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 NANOS2P60321 138 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PDE1BQ01064 536 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 BNC1Q01954 994 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 ROR2Q01974 943 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PLA2G7Q13093 441 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PRKAA1Q13131 559 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 DHX34Q14147 1143 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PTGISQ16647 500 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 CTU2Q2VPK5 515 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 C8orf82Q6P1X6 216 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PRSS55Q6UWB4 352 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 BTNL8Q6UX41 500 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PIGWQ7Z7B1 504 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 CPSF7Q8N684 471 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 RBMXL3Q8N7X1 1067 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 NCOA7Q8NI08 942 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PSMA8Q8TAA3 256 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PPP4R1Q8TF05 950 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 P2RX5Q93086 422 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 ABTB1Q969K4 478 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 THOC3Q96J01 351 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 CSF3RQ99062 836 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 ZPBPQ9BS86 351 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 VN1R1Q9GZP7 353 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 LSG1Q9H089 658 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 ACKR4Q9NPB9 350 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PDRG1Q9NUG6 133 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 MIOSQ9NXC5 875 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 HMG20BQ9P0W2 317 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 FBXW2Q9UKT8 454 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PIN4Q9Y237 131 aaKnown RBP4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PTGDR2Q9Y5Y4 395 aa4.29□□□□□ -1.72
CSDE1-211ENST00000525970 PDS5AQ29RF7 1337 aaKnown RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ZCWPW2A0A1B0GU75 182 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 C13orf42A0A1B0GVH6 325 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 A0A1W2PPW3 197 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 HYKKA2RU49 373 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ANKRD66B4E2M5 251 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 BUD23O43709 281 aaKnown RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 LUC7L3O95232 432 aaKnown RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 GSRP00390 522 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ANKRD34CP0C6C1 535 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 T-ENOLP0DO92 83 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms