RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SMIM15Q7Z3B0 74 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 P4HA3Q7Z4N8 544 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 DPPA2Q7Z7J5 298 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 BIVMQ86UB2 503 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 NT5DC3Q86UY8 548 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 PLCZ1Q86YW0 608 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ARID3BQ8IVW6 561 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 GRAMD1CQ8IYS0 662 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF679Q8IYX0 411 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 AOPEPQ8N6M6 819 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 OR5H6Q8NGV6 325 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 BBS10Q8TAM1 723 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF398Q8TD17 642 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 MITD1Q8WV92 249 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ING5Q8WYH8 240 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 PIK3R3Q92569 461 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 KHSRPQ92945 711 aaKnown RBP eCLIP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 BOD1Q96IK1 185 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF668Q96K58 619 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF514Q96K75 400 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 FAM118BQ9BPY3 351 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 SH2D3AQ9BRG2 576 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 COLEC11Q9BWP8 271 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 NPLQ9BXD5 320 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 POLR3FQ9H1D9 316 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 OR52A5Q9H2C5 316 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ADAM7Q9H2U9 754 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 GAL3ST2Q9H3Q3 398 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 EPHX3Q9H6B9 360 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CCDC134Q9H6E4 229 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 GAREM1Q9H706 876 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ECT2Q9H8V3 914 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CYP3A43Q9HB55 503 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CHMP1AQ9HD42 196 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ADAP2Q9NPF8 381 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 XPNPEP1Q9NQW7 623 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 MRPL17Q9NRX2 175 aaKnown RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 GJB4Q9NTQ9 266 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ARL8BQ9NVJ2 186 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 RBAKQ9NYW8 714 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 KCND2Q9NZV8 630 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 WRAP73Q9P2S5 460 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 EPHA6Q9UF33 1036 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 FOXD3Q9UJU5 478 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF229Q9UJW7 825 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 AMFRQ9UKV5 643 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 SARDHQ9UL12 918 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ABCG2Q9UNQ0 655 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 MGAT4BQ9UQ53 548 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CLCA2Q9UQC9 943 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 KLHL20Q9Y2M5 609 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 KCNK7Q9Y2U2 307 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 HCFC2Q9Y5Z7 792 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 AUP1Q9Y679 476 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CAPN6Q9Y6Q1 641 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 RNF215Q9Y6U7 377 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 MYO10Q9HD67 2058 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 A0A075B6Q4 140 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 POTEMA6NI47 508 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 M0QZK8 103 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 EEF2KO00418 725 aaKnown RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 TPP1O14773 563 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 SLC16A6O15403 523 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 SPINT1O43278 529 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 HTRA2O43464 458 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 MED7O43513 233 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 DYRK3O43781 588 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 PDE9AO76083 593 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 SORBS2O94875 1100 aaKnown RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CXCL14O95715 111 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 BMP15O95972 392 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 PEX11BO96011 259 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CALCAP01258 141 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 IGHV2-70P01814 119 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CSTBP04080 98 aaKnown RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 SOD2P04179 222 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CRHP06850 196 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 LIPFP07098 398 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 C8BP07358 591 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 GP1BAP07359 652 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 GSTP1P09211 210 aaKnown RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 PFKLP17858 780 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CMA1P23946 247 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 RORAP35398 523 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 GRIA2P42262 883 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CDKN2CP42773 168 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 ERFP50548 548 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 WNT7BP56706 349 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 SOX8P57073 446 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 MC1RQ01726 317 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CKAP4Q07065 602 aaKnown RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 ELAVL2Q12926 359 aaKnown RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 LCP2Q13094 533 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 KYNUQ16719 465 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 QPCTQ16769 361 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 DCAF6Q58WW2 860 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF311Q5JNZ3 666 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms