RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 ELOVL7A1L3X0 281 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TMEM202A6NGA9 273 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HIDE1A8MVS5 230 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CXCR6O00574 342 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 DEAF1O75398 565 aaPredicted RBP10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MOSPD3O75425 235 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LRATO95237 230 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 C1QCP02747 245 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 C8GP07360 202 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TYRP14679 529 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SDC1P18827 310 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CDKN2CP42773 168 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ARSFP54793 590 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CDKL4Q5MAI5 379 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 C1orf53Q5VUE5 145 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ABRAXAS1Q6UWZ7 409 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 Q6ZVL8 140 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GALNT13Q8IUC8 556 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GPR65Q8IYL9 337 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 NAT16Q8N8M0 369 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CYB5D2Q8WUJ1 264 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GFM2Q969S9 779 aaKnown RBP10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 KAT8Q9H7Z6 458 aaKnown RBP10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 INVSQ9Y283 1065 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HCFC2Q9Y5Z7 792 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 NUP214P35658 2090 aaPredicted RBP10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GFYI3L273 518 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 EIF3FO00303 357 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GMNNO75496 209 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ASLP04424 464 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ADH1AP07327 375 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HIST1H2AGP0C0S8 130 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HIST1H2ADP20671 130 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ETV3P41162 512 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CDK9P50750 372 aaKnown RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CLDN8P56748 225 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ERVFC1P60507 584 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CTBSQ01459 385 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 RBBP5Q15291 538 aaKnown RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LRRC26Q2I0M4 334 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GGTA1PQ4G0N0 100 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ANKRD34AQ69YU3 496 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 NECAB2Q7Z6G3 386 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 STK32CQ86UX6 486 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PLPP6Q8IY26 295 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HS3ST5Q8IZT8 346 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ELMO1Q92556 727 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 FOXJ1Q92949 421 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 IRF7Q92985 503 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HIC2Q96JB3 615 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HIST1H2AHQ96KK5 128 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HIST1H2AJQ99878 128 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CPPED1Q9BRF8 314 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 H2AFJQ9BTM1 129 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PKD2L2Q9NZM6 624 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CXorf51AA0A1B0GTR3 108 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 OR2AG2A6NM03 316 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TTC34A8MYJ7 566 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LEFTY1O75610 366 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TRMUO75648 421 aaKnown RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PRKD3O94806 890 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ALPLP05186 524 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MPC1LP0DKB6 136 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PTPN6P29350 595 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PPP1R8Q12972 351 aaKnown RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 DAG1Q14118 895 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 POM121L1PQ3SYA9 428 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LY6G5CQ5SRR4 150 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CHST15Q7LFX5 561 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MICU2Q8IYU8 434 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 AADATQ8N5Z0 425 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 L3MBTL4Q8NA19 623 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 FAM162AQ96A26 154 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SLC47A1Q96FL8 570 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 APOLD1Q96LR9 279 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 EMILIN2Q9BXX0 1053 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CRISPLD2Q9H0B8 497 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LTB4R2Q9NPC1 389 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TUBA8Q9NY65 449 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GPRC5BQ9NZH0 403 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 THEGQ9P2T0 379 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CIDEBQ9UHD4 219 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SNX6Q9UNH7 406 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HEMK1Q9Y5R4 338 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 FADS2P1A8MWK0 482 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 UPK3BL1B0FP48 263 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 UPK3BL2E5RIL1 263 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HOXB9P17482 250 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 S100A3P33764 101 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SHMT2P34897 504 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GZMMP51124 257 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ALDH3A2P51648 485 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SH3BGRP55822 239 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PFN3P60673 137 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PGS1Q32NB8 556 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 C11orf91Q3C1V1 193 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ARSIQ5FYB1 569 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PLEKHS1Q5SXH7 462 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ZDHHC20Q5W0Z9 365 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TCAIMQ8N3R3 496 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms