RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 CCL22O00626 93 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 ZNF189O75820 626 aaPredicted RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 SLC35G4P0C7Q5 338 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 RALBP11234 206 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 ATP1B2P14415 290 aaPredicted RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 POLR2CP19387 275 aaPredicted RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 NR1D1P20393 614 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 ITGALP20701 1170 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 PSMA3P25788 255 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 HADHAP40939 763 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 CETN2P41208 172 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 ARCN1P48444 511 aaKnown RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 CDKN1CP49918 316 aaPredicted RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 NAP1L1P55209 391 aaKnown RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 CCZ1BP86790 482 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 CCZ1P86791 482 aaPredicted RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 GPR19Q15760 415 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 PARP6Q2NL67 630 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 GPR33Q49SQ1 333 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 PLEKHS1Q5SXH7 462 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 ARMC6Q6NXE6 501 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 FAM199XQ6PEV8 388 aaPredicted RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 ZNF517Q6ZMY9 492 aaPredicted RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 MCATQ8IVS2 390 aaKnown RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 APLFQ8IW19 511 aaPredicted RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 SLC38A9Q8NBW4 561 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 FAM13CQ8NE31 585 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 ACVR1CQ8NER5 493 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 OR8K5Q8NH50 307 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 DNAJC1Q96KC8 554 aaKnown RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 LRFN5Q96NI6 719 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 TBL1YQ9BQ87 522 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 OR52A5Q9H2C5 316 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 ACTL8Q9H568 366 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 COG4Q9H9E3 785 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 SSU72Q9NP77 194 aaKnown RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 C1GALT1Q9NS00 363 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 NOP53Q9NZM5 478 aaKnown RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 TLK1Q9UKI8 766 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 POMT2Q9UKY4 750 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 PYCARDQ9ULZ3 195 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 FARSAQ9Y285 508 aaKnown RBP9□□□□□ -0.97
CTNNA1-221ENST00000520339 HEBP2Q9Y5Z4 205 aa9□□□□□ -0.97
CTNNA1-221ENST00000520339 TENM4Q6N022 2769 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 SLC9B1P1A6NJY1 282 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 BTN3A3O00478 584 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 RFPL1O75677 317 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 SCRG1O75711 98 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 ALX3O95076 343 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 METTL18O95568 372 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 PRSS56P0CW18 603 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 TPH1P17752 444 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 PDHA2P29803 388 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 PRDX3P30048 256 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 MC4RP32245 332 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 CD151P48509 253 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 VAV2P52735 878 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 RPS18P62269 152 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 KLRB1Q12918 225 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 PRKAA1Q13131 559 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 GPS2Q13227 327 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 SEMA5AQ13591 1074 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 KRT33BQ14525 404 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 UGT8Q16880 541 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 ZNF789Q5FWF6 425 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 TMTC4Q5T4D3 741 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 PRAMEF17Q5VTA0 474 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 LCN10Q6JVE6 187 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 UNC5AQ6ZN44 842 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 ASB18Q6ZVZ8 466 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 SYVN1Q86TM6 617 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 SERPINA9Q86WD7 417 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 PIANPQ8IYJ0 282 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 TAB3Q8N5C8 712 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 FAM71DQ8N9W8 422 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 ACRBPQ8NEB7 543 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 LCN9Q8WX39 176 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 THAP4Q8WY91 577 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 CDKN2AIPNLQ96HQ2 116 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 NRTNQ99748 197 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 CHST8Q9H2A9 424 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 TFB2MQ9H5Q4 396 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 RRAGDQ9NQL2 400 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 NLE1Q9NVX2 485 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 MAN2B2Q9Y2E5 1009 aa8.99□□□□□ -0.97
CTNNA1-221ENST00000520339 CLEC18AA5D8T8 446 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 F8W735 103 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 MATN2O00339 956 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 BTN3A1O00481 513 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 ZNF500O60304 480 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 DNAJB5O75953 348 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 IPO7O95373 1038 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 MSL3P1P0C860 447 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 ST6GAL1P15907 406 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 CDH3P22223 829 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 ACRV1P26436 265 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 NTF4P34130 210 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 RORAP35398 523 aa8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 RPS15P62841 145 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-221ENST00000520339 CACNG1Q06432 222 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms