RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 RIC8BQ9NVN3 520 aa9.42□□□□□ -0.9
SH2D4A-202ENST00000518040 STMN3Q9NZ72 180 aa9.42□□□□□ -0.9
SH2D4A-202ENST00000518040 IP6K2Q9UHH9 426 aa9.42□□□□□ -0.9
SH2D4A-202ENST00000518040 MKL2Q9ULH7 1088 aa9.42□□□□□ -0.9
SH2D4A-202ENST00000518040 MYO6Q9UM54 1294 aa9.42□□□□□ -0.9
SH2D4A-202ENST00000518040 SPO11Q9Y5K1 396 aa9.42□□□□□ -0.9
SH2D4A-202ENST00000518040 PRRC2AP48634 2157 aaKnown RBP9.42□□□□□ -0.9
SH2D4A-202ENST00000518040 ACANP16112 2415 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 CFAP99D6REC4 459 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 PRRG2O14669 202 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 TTI1O43156 1089 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 ZWINTO95229 277 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 EPOP01588 193 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 PRLHRP49683 370 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 TMPRSS15P98073 1019 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 ALDH6A1Q02252 535 aaKnown RBP9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 ZBTB17Q13105 803 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 BOP1Q14137 746 aaKnown RBP9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 DPYSL3Q14195 570 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 KRT31Q15323 416 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 TXNRD3NBQ6F5E7 133 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 HIBCHQ6NVY1 386 aaPredicted RBP9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 DMRTC2Q8IXT2 367 aaPredicted RBP9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 SIRT6Q8N6T7 355 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 TTC29Q8NA56 475 aaPredicted RBP9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 AGAP11Q8TF27 550 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 TFGQ92734 400 aaPredicted RBP9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 MIEF2Q96C03 454 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 ALPK1Q96QP1 1244 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 OR52A5Q9H2C5 316 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 CUTCQ9NTM9 273 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 MYO1AQ9UBC5 1043 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 CTSFQ9UBX1 484 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 POLG2Q9UHN1 485 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 ABCA4P78363 2273 aa9.41□□□□□ -0.9
SH2D4A-202ENST00000518040 CHRM5P08912 532 aaPredicted RBP9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 CD48P09326 243 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 GSTM1P09488 218 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 COX6A1P12074 109 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 ARSEP51690 589 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 PRR20EP86478 221 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 PRR20CP86479 221 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 PRR20DP86480 221 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 PRR20BP86481 221 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 PRR20AP86496 221 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 GSTM4Q03013 218 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 GBE1Q04446 702 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 KLC1Q07866 573 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 KIR2DS3Q14952 304 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 SKOR2Q2VWA4 1001 aaPredicted RBP9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 TFDP3Q5H9I0 405 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 ZNF766Q5HY98 468 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 ZC3H12BQ5HYM0 836 aaKnown RBP9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 UNC5AQ6ZN44 842 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 SHISA6Q6ZSJ9 500 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 GLT6D1Q7Z4J2 308 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 IRF2BP2Q7Z5L9 587 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 DAAM2Q86T65 1068 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 TRIM73Q86UV7 250 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 GHDCQ8N2G8 530 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 TAB3Q8N5C8 712 aaPredicted RBP9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 KCTD6Q8NC69 237 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 GBP4Q96PP9 640 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 DMRTA2Q96SC8 542 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 HGH1Q9BTY7 390 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 XKR8Q9H6D3 395 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 COG4Q9H9E3 785 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 INTS7Q9NVH2 962 aaKnown RBP9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 ZNF282Q9UDV7 671 aaPredicted RBP9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 C3orf18Q9UK00 162 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 PPT2Q9UMR5 302 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 ICKQ9UPZ9 632 aa9.4□□□□□ -0.9
SH2D4A-202ENST00000518040 FAM171A2A8MVW0 826 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 FAM227AF5H4B4 570 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 DDX3XO00571 662 aaKnown RBP eCLIP9.39□□□□□ -0.919e-7■■■□□ 18.6
SH2D4A-202ENST00000518040 STX7O15400 261 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 GPR39O43194 453 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 GADD45BO75293 160 aaPredicted RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 CTSBP07858 339 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 HOXD4P09016 255 aaPredicted RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ZGLP1P0C6A0 271 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 CDK11BP21127 795 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 DNASE1P24855 282 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 MYBPHQ13203 477 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 PRKG2Q13237 762 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 DPCR1Q3MIW9 517 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 TMEM211Q6ICI0 200 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 PRMT9Q6P2P2 845 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 CAMKMTQ7Z624 323 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 MCATQ8IVS2 390 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 FAM98AQ8NCA5 519 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 PHC3Q8NDX5 983 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 STT3BQ8TCJ2 826 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ULK4Q96C45 1275 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 FAF2Q96CS3 445 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ASB8Q9H765 288 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ZNF304Q9HCX3 659 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 KCNJ16Q9NPI9 418 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ST6GALNAC2Q9UJ37 374 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 CPAMD8Q8IZJ3 1885 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms