RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 KEAP1Q14145 624 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 UBE2UQ5VVX9 321 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 RSBN1Q5VWQ0 802 aaPredicted RBP12.09□□□□□ -0.47
PCM1-203ENST00000517545 CD300LGQ6UXG3 332 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 GDPD3Q7L5L3 318 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 SPATA2LQ8IUW3 424 aaPredicted RBP12.09□□□□□ -0.47
PCM1-203ENST00000517545 PARP16Q8N5Y8 322 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 OR52E4Q8NGH9 312 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 GPR152Q8TDT2 470 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 DNASE1L2Q92874 299 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 TP53INP1Q96A56 240 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 MMP27Q9H306 513 aa12.09□□□□□ -0.47
PCM1-203ENST00000517545 PDP1Q9P0J1 537 aaPredicted RBP12.09□□□□□ -0.47
PCM1-203ENST00000517545 NDRG4Q9ULP0 352 aaKnown RBP12.09□□□□□ -0.47
PCM1-203ENST00000517545 E5RI56 91 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 M0R082 166 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 CDKN2CP42773 168 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 ZRANB3Q5FWF4 1079 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 TPRG1LQ5T0D9 272 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 OVOS1Q6IE37 1185 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 Q6ZPB1 254 aaPredicted RBP12.08□□□□□ -0.48
PCM1-203ENST00000517545 USP43Q70EL4 1123 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 SNX20Q7Z614 316 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 CALHM3Q86XJ0 350 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 KLHDC9Q8NEP7 349 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 APH1BQ8WW43 257 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 SLC38A4Q969I6 547 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 PDLIM5Q96HC4 596 aaKnown RBP12.08□□□□□ -0.48
PCM1-203ENST00000517545 PPP3R2Q96LZ3 170 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 CPPED1Q9BRF8 314 aaPredicted RBP12.08□□□□□ -0.48
PCM1-203ENST00000517545 SIRT5Q9NXA8 310 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 HECAQ9UBI9 543 aaPredicted RBP12.08□□□□□ -0.48
PCM1-203ENST00000517545 NUP214P35658 2090 aaPredicted RBP12.08□□□□□ -0.48
PCM1-203ENST00000517545 BRCA2P51587 3418 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 TLR5O60602 858 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 GUCY1B2O75343 617 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 RECQL5O94762 991 aaPredicted RBP12.08□□□□□ -0.48
PCM1-203ENST00000517545 DDNO94850 711 aaPredicted RBP12.08□□□□□ -0.48
PCM1-203ENST00000517545 EPOP01588 193 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 MC4RP32245 332 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 GJA5P36382 358 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 DDR2Q16832 855 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 OR2T5Q6IEZ7 315 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 VTCN1Q7Z7D3 282 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 OR2T29Q8NH02 315 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 MTFMTQ96DP5 389 aaKnown RBP12.08□□□□□ -0.48
PCM1-203ENST00000517545 CDCA5Q96FF9 252 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 APOL4Q9BPW4 351 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 CDADC1Q9BWV3 514 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 ITPAQ9BY32 194 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 NACA2Q9H009 215 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 CLMPQ9H6B4 373 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 ELOVL2Q9NXB9 296 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 ST3GAL5Q9UNP4 418 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 LOC100506127A0A0U1RQW1 187 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 FAM220BPB1ANY3 271 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 PRAMEF11O60813 436 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 SEC22BO75396 215 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 CCNKO75909 580 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 MAGEA2P43356 314 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 BEX3Q00994 111 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 FAM171A1Q5VUB5 890 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 TAS2R42Q7RTR8 314 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 CFAP52Q8N1V2 620 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 SH3GL1Q99961 368 aa12.08□□□□□ -0.48
PCM1-203ENST00000517545 ABI2Q9NYB9 513 aaPredicted RBP12.08□□□□□ -0.48
PCM1-203ENST00000517545 GBF1Q92538 1859 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 TAF4O00268 1085 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 KRT75O95678 551 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 IL6P05231 212 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 PSEN2P49810 448 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 VLDLRP98155 873 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 PCBP2Q15366 365 aaKnown RBP eCLIP12.07□□□□□ -0.48
PCM1-203ENST00000517545 SBSNQ6UWP8 590 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 EFHBQ8N7U6 833 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 SIGLEC11Q96RL6 698 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 TINF2Q9BSI4 451 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 TNKS2Q9H2K2 1166 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 ABHD16BQ9H3Z7 469 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 MOV10Q9HCE1 1003 aaKnown RBP12.07□□□□□ -0.48
PCM1-203ENST00000517545 SERHLQ9NQF3 203 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 NUDT4Q9NZJ9 180 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 RNF6Q9Y252 685 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 UGT2A1Q9Y4X1 527 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 IGLV3-10A0A075B6K4 115 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 SAGE2PA6NJ88 616 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 RGS13O14921 159 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 PTTG1O95997 202 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 OTCP00480 354 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 CTSHP09668 335 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 PPP3CCP48454 512 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 RPP38P78345 283 aaKnown RBP12.07□□□□□ -0.48
PCM1-203ENST00000517545 ATG9BQ674R7 924 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 RGL4Q8IZJ4 473 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 ATG16L2Q8NAA4 619 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 LILRB4Q8NHJ6 448 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 GABARAPL1Q9H0R8 117 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 ABCG8Q9H221 673 aa12.07□□□□□ -0.48
PCM1-203ENST00000517545 VPS4AQ9UN37 437 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms