RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 HTR3DQ70Z44 454 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 ADGRD2Q7Z7M1 963 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 WDR49Q8IV35 697 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 FAM9CQ8IZT9 166 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC43A2Q8N370 569 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMEM132CQ8N3T6 1108 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 GALNT16Q8N428 558 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 D2HGDHQ8N465 521 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 KLHL36Q8N4N3 616 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 PARP16Q8N5Y8 322 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 BCORP1Q8N888 145 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR2AJ1Q8NGZ0 328 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR4A16Q8NH70 328 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 DNAJA4Q8WW22 397 aaPredicted RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 RLN3Q8WXF3 142 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 RASD2Q96D21 266 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 C19orf60Q96EN9 201 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 DAZAP1Q96EP5 407 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 PGM2Q96G03 612 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 LRFN5Q96NI6 719 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 FRG2BQ96QU4 278 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR6C1Q96RD1 312 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 C17orf62Q9BQA9 187 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 FNDC11Q9BVV2 318 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 NMNAT2Q9BZQ4 307 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 SYNDIG1Q9H7V2 258 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 MKKSQ9NPJ1 570 aaPredicted RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 COPS7AQ9UBW8 275 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 NDRG3Q9UGV2 375 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 KCNE5Q9UJ90 142 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 CTNND2Q9UQB3 1225 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 OAS3Q9Y6K5 1087 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 DISP3Q9P2K9 1392 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 HEG1Q9ULI3 1381 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 KIF7Q2M1P5 1343 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 KANSL1LA0AUZ9 987 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 FEZF1A0PJY2 475 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 PIPSLA2A3N6 862 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMEM202A6NGA9 273 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 ACOD1A6NK06 481 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 ANKRD30BLA7E2S9 258 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 A8MUI8 341 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 SPECC1L-ADORA2AF8WAN1 911 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 CLIC1O00299 241 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC28A1O00337 649 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC16A5O15375 505 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 NDUFS4O43181 175 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZNF208O43345 1280 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 MSI1O43347 362 aaKnown RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 GRID2O43424 1007 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 WBP4O75554 376 aaKnown RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 ARHGEF15O94989 841 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 MBD3O95983 291 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 OTCP00480 354 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 PLA2G1BP04054 148 aaKnown RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 PROS1P07225 676 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 MPZP25189 248 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 RPL13P26373 211 aaKnown RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 APOBEC3AP31941 199 aaPredicted RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 CHI3L1P36222 383 aaPredicted RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 DLSTP36957 453 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC1A3P43003 542 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 SYKP43405 635 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 IER3P46695 156 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 LHX1P48742 406 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 SNRPEP62304 92 aaKnown RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 STIM1Q13586 685 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 CUL1Q13616 776 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 GK2Q14410 553 aaPredicted RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 PDIA5Q14554 519 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 MFSD13AQ14CX5 517 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 PHYHD1Q5SRE7 291 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMEM63BQ5T3F8 832 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 TAF3Q5VWG9 929 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 NSUN5P2Q63ZY6 315 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 B3GNTL1Q67FW5 361 aaPredicted RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 SP5Q6BEB4 398 aaPredicted RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 MFSD12Q6NUT3 480 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 SIGLEC15Q6ZMC9 328 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 Q6ZWC4 215 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 LINGO2Q7L985 606 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 TRIM74Q86UV6 250 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 TRIM73Q86UV7 250 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZC3HC1Q86WB0 502 aaKnown RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 CCDC25Q86WR0 208 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 LAX1Q8IWV1 398 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 C16orf71Q8IYS4 520 aaPredicted RBP3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 UBQLNLQ8IYU4 475 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 FUKQ8N0W3 1084 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 THEM5Q8N1Q8 247 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 UBE2J2Q8N2K1 259 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 CERS5Q8N5B7 392 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 AADATQ8N5Z0 425 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 MINDY2Q8NBR6 621 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 MDGA1Q8NFP4 955 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 BEST2Q8NFU1 509 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR1J2Q8NGS2 313 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 GOLGA5Q8TBA6 731 aa3.81□□□□□ -1.8
RNU4-60P-201ENST00000517239 CACTINQ8WUQ7 758 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms