RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 OR2A25A4D2G3 310 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR51F1A6NGY5 319 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 LRRC14BA6NHZ5 514 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 NCF1BA6NI72 391 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 AGAP5A6NIR3 686 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 NCF1CA8MVU1 366 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TTC34A8MYJ7 566 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 J3KR12 359 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 M0QZQ0 153 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 HAS3O00219 553 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CDC7O00311 574 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PRMT5O14744 637 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KHNYNO15037 678 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PER2O15055 1255 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ANKRD28O15084 1053 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 MUSKO15146 869 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 GPR182O15218 404 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 AIREO43918 545 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 NOBOXO60393 691 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 DFNA5O60443 496 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KPNA6O60684 536 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 XYLBO75191 536 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ULK1O75385 1050 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZBTB7AO95365 584 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 GLUD1P00367 558 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 SERPINA1P01009 418 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KRT6AP02538 564 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KRT6BP04259 564 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 RPLP0P05388 317 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 FABP3P05413 133 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PGRP06401 933 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CAPN1P07384 714 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 NCF1P14598 390 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CD36P16671 472 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 AGXTP21549 392 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PPIBP23284 216 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 RPS3P23396 243 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ACVR2AP27037 513 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 S100A3P33764 101 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PIGAP37287 484 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CTSKP43235 329 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KRT6CP48668 564 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PRIM2P49643 509 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLCNKBP51801 687 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 MLLT10P55197 1068 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 FCGRTP55899 365 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TPTEP56180 551 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ERVPABLB-1P60509 514 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PSMA6P60900 246 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAXP61244 160 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 VBP1P61758 197 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 RPL38P63173 70 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ADAM17P78536 824 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 MRPS6P82932 125 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 RING1Q06587 406 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 GTF2H2Q13888 395 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAD2L1BPQ15013 274 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PON2Q15165 354 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TBCEQ15813 527 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 NFE2Q16621 373 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLPPQ16740 277 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 UPP1Q16831 310 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 DPY19L1Q2PZI1 675 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PGS1Q32NB8 556 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 INAVAQ3KP66 663 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ADPRMQ3LIE5 342 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM174BQ3ZCQ3 159 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TIGD5Q53EQ6 642 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PYCR3Q53H96 274 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 INO80DQ53TQ3 878 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 MS4A13Q5J8X5 152 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 HABP4Q5JVS0 413 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CDKL4Q5MAI5 379 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 LRIF1Q5T3J3 769 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PIK3R6Q5UE93 754 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 MLIPQ5VWP3 458 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 LYPLAL1Q5VWZ2 237 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KIAA1614Q5VZ46 1190 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KDM4DQ6B0I6 523 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR2T5Q6IEZ7 315 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF544Q6NX49 715 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 GTF2H2CQ6P1K8 395 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CCDC81Q6ZN84 652 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 Q6ZSR9 355 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PIWIL3Q7Z3Z3 882 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 GOLGA7Q7Z5G4 137 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 SNX20Q7Z614 316 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 MRPL10Q7Z7H8 261 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 B3GNT8Q7Z7M8 397 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 C14orf80Q86SX3 495 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CALHM3Q86XJ0 350 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KRT73Q86Y46 540 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 LYSMD2Q8IV50 215 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 P3H2Q8IVL5 708 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF683Q8IZ20 524 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TTC29Q8NA56 475 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 POC5Q8NA72 575 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 GALNT6Q8NCL4 622 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR13C4Q8NGS5 318 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR2T11Q8NH01 316 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms