RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 EPCAMP16422 314 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 RBL1P28749 1068 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 RANBP1P43487 201 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CARD18P57730 90 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 HNRNPDQ14103 355 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ANKRD20A2Q5SQ80 823 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ANKRD20A1Q5TYW2 823 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ANKRD20A3Q5VUR7 823 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 NADSYN1Q6IA69 706 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 C6orf89Q6UWU4 347 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 LINC00114Q6XXX2 140 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ZNF574Q6ZN55 896 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CENPUQ71F23 418 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 PIWIL3Q7Z3Z3 882 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ARHGAP12Q8IWW6 846 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CMTM8Q8IZV2 173 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 RIBC1Q8N443 379 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 C10orf53Q8N6V4 93 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 SHKBP1Q8TBC3 707 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 WFDC12Q8WWY7 111 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 NCSTNQ92542 709 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ADAD1Q96M93 576 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 HS6ST2Q96MM7 605 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 RPRD1AQ96P16 312 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 IL12RB2Q99665 862 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 SLC2A11Q9BYW1 496 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 C10orf88Q9H8K7 445 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ETNK2Q9NVF9 386 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 EURLQ9NYK6 297 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 DNMT3BQ9UBC3 853 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 DNAJB9Q9UBS3 223 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 AGO1Q9UL18 857 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 KIAA1549LQ6ZVL6 1849 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CCDC195A0A1B0GUA6 201 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 TMEM120BA0PK00 339 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 C2orf78A6NCI8 922 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 E7ESA3 106 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 MOCS2O96007 188 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CYBBP04839 570 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 FSTP19883 344 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 IL11P20809 199 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 AVPR1AP37288 418 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 SLC6A11P48066 632 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 PLK1P53350 603 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 RUNX1T1Q06455 604 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ZNF177Q13360 481 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 DMC1Q14565 340 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 FASTKD3Q14CZ7 662 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 GALNTL6Q49A17 601 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 TEX44Q53QW1 395 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CRB2Q5IJ48 1285 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 KANK2Q63ZY3 851 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 MTFR2Q6P444 385 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 C11orf88Q6PI97 169 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 PAOXQ6QHF9 649 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 GPR149Q86SP6 731 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 LINC00523Q86TU6 105 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ZC3H18Q86VM9 953 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ZBED8Q8IZ13 594 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 LGI2Q8N0V4 545 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 TEX26Q8N6G2 289 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 FAM71DQ8N9W8 422 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 SLC22A8Q8TCC7 542 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CPT1BQ92523 772 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 MIEF2Q96C03 454 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 ZNF707Q96C28 371 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 INTS12Q96CB8 462 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 P2RY11Q96G91 374 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 APOPT1Q96IL0 206 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CEP41Q9BYV8 373 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 GORASP2Q9H8Y8 452 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 GDE1Q9NZC3 331 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 FETUBQ9UGM5 382 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 SLC23A1Q9UHI7 598 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 MOSPD1Q9UJG1 213 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CDC42EP3Q9UKI2 254 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 NUDT5Q9UKK9 219 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 VANGL2Q9ULK5 521 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 RCE1Q9Y256 329 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 AAR2Q9Y312 384 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 CPQQ9Y646 472 aa6.99□□□□□ -1.29
CLCN3-206ENST00000507875 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.99□□□□□ -1.29
CLCN3-206ENST00000507875 NUP205Q92621 2012 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 VCANP13611 3396 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 EXOC1LA0A1B0GW35 172 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 ZC3H12DA2A288 527 aaKnown RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 H3BM21 787 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 RRP8O43159 456 aaKnown RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 RAMP2O60895 175 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 MOSPD3O75425 235 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 ANXA9O76027 345 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 SUN1O94901 812 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 CELA2BP08218 269 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 SPATA31D3P0C874 917 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 DSTNP60981 165 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 ILF2Q12905 390 aaKnown RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 PDIA2Q13087 525 aaKnown RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 KCNJ11Q14654 390 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 ANKRD54Q6NXT1 300 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms