RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 ZNF554Q86TJ5 538 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 PSMA8Q8TAA3 256 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 ZFAND2BQ8WV99 257 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 AUTS2Q8WXX7 1259 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 RAD51AP1Q96B01 352 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 NUS1Q96E22 293 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 EFCAB11Q9BUY7 163 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 OSBPL10Q9BXB5 764 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 CLIC1O00299 241 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 RSL1D1O76021 490 aaKnown RBP10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 STC2O76061 302 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 PRKD3O94806 890 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 PCCBP05166 539 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 HTR1EP28566 365 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 HSD17B2P37059 387 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 PERM1Q5SV97 790 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 NANOGP8Q6NSW7 305 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 TLDC1Q6P9B6 456 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 RBM23Q86U06 439 aaKnown RBP10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 OXR1Q8N573 874 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 CLDN19Q8N6F1 224 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 FCGR1BQ92637 280 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 NT5C3BQ969T7 300 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 COL26A1Q96A83 441 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 AURKBQ96GD4 344 aaPredicted RBP10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 MGME1Q9BQP7 344 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 NANOGQ9H9S0 305 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 ITM2CQ9NQX7 267 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 RAPGEFL1Q9UHV5 662 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 SLC22A14Q9Y267 594 aa10.53□□□□□ -0.72
LIMCH1-205ENST00000503057 AP2A2O94973 939 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 CCNB2O95067 398 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 ENGP17813 658 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 CENPAP49450 140 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 HEPACAMQ14CZ8 416 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 XKR4Q5GH76 650 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 PLEKHS1Q5SXH7 462 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 ZNF697Q5TEC3 545 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 NCEH1Q6PIU2 408 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 BLOC1S3Q6QNY0 202 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 SRFBP1Q8NEF9 429 aaKnown RBP10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 MCFD2Q8NI22 146 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 RERGQ96A58 199 aaPredicted RBP10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 PYCR2Q96C36 320 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 R3HDMLQ9H3Y0 253 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 PRDM8Q9NQV8 689 aa10.52□□□□□ -0.72
LIMCH1-205ENST00000503057 SBF2Q86WG5 1849 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 RNASEH2AO75792 299 aaKnown RBP10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 DNTTP04053 509 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 ITGB1P05556 798 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 GDF5P43026 501 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 TAS2R41P59536 307 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 TLE2Q04725 743 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 ZNHIT3Q15649 155 aaPredicted RBP10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 CLLU1OSQ5K130 101 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 THOC6Q86W42 341 aaKnown RBP10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 ZZZ3Q8IYH5 903 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 RNFT2Q96EX2 444 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 ZNF641Q96N77 438 aaPredicted RBP10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 FAM120CQ9NX05 1096 aaKnown RBP10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 SSR3Q9UNL2 185 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 ERVW-1Q9UQF0 538 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 DNAJC15Q9Y5T4 150 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 UPK3BL1B0FP48 263 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 UPK3BL2E5RIL1 263 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 EPHX1P07099 455 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 HOXD8P13378 290 aaPredicted RBP10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 ABHD18Q0P651 414 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 IL18R1Q13478 541 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 SLC14A2Q15849 920 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 PSAPL1Q6NUJ1 521 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 AHSA2Q719I0 299 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 GATAD2AQ86YP4 633 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 ENKURQ8TC29 256 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 PYURFQ96I23 114 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 RDH12Q96NR8 316 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 SERHL2Q9H4I8 314 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 SERHLQ9NQF3 203 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 DRGXA6NNA5 263 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 TNNI3P19429 210 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 IDSP22304 550 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 KELP23276 732 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 CDH12P55289 794 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 KCTD11Q693B1 232 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 OR4F3Q6IEY1 312 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 NATD1Q8N6N6 113 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 ANKFN1Q8N957 763 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 MCMBPQ9BTE3 642 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 ABCB10Q9NRK6 738 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 EXD2Q9NVH0 621 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 MTRRQ9UBK8 725 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 MAFFQ9ULX9 164 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 PCDHB3Q9Y5E6 796 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 TAF1LQ8IZX4 1826 aa10.52□□□□□ -0.73
LIMCH1-205ENST00000503057 INPPL1O15357 1258 aa10.51□□□□□ -0.73
LIMCH1-205ENST00000503057 SLC16A5O15375 505 aa10.51□□□□□ -0.73
LIMCH1-205ENST00000503057 CREG1O75629 220 aa10.51□□□□□ -0.73
LIMCH1-205ENST00000503057 RASAL1O95294 804 aa10.51□□□□□ -0.73
LIMCH1-205ENST00000503057 MATN4O95460 622 aa10.51□□□□□ -0.73
LIMCH1-205ENST00000503057 CDH3P22223 829 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms