RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 RHBDD2Q6NTF9 364 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 TCTN3Q6NUS6 607 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 CASC4Q6P4E1 433 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 FAM198BQ6UWH4 519 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 DNAJC22Q8N4W6 341 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 LINC01555Q8NAE3 123 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 OR2L8Q8NGY9 312 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 SKA2Q8WVK7 121 aaPredicted RBP8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 FOPNLQ96NB1 174 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 BIRC8Q96P09 236 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 IL17FQ96PD4 163 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 TCF12Q99081 682 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 MENTQ9BUN1 341 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 RAB11FIP5Q9BXF6 653 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 CHRNA10Q9GZZ6 450 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 EPN3Q9H201 632 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 CLMPQ9H6B4 373 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 GRPEL1Q9HAV7 217 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 ACSS2Q9NR19 701 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 PLA2G2EQ9NZK7 142 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 CIDEBQ9UHD4 219 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 TLK1Q9UKI8 766 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 TCFL5Q9UL49 500 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 SLC39A10Q9ULF5 831 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 MRFAP1Q9Y605 127 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 NFS1Q9Y697 457 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 AP1M2Q9Y6Q5 423 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 BOD1L1Q8NFC6 3051 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 BSNQ9UPA5 3926 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 GOLGA6L10A0A0M3HER8 536 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 FAM237BA0A1B0GVD1 139 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ARGFXA6NJG6 315 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 C9J4A7 227 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 GOLGA8MH3BSY2 632 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 SEC16AO15027 2179 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ZSCAN9O15535 394 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ZSCAN12O43309 604 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 NIPSNAP2O75323 286 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 DNAJB5O75953 348 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 C1orf105O95561 183 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ESR1P03372 595 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CAPN1P07384 714 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 MLNP12872 115 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CHRM3P20309 590 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 NR1D1P20393 614 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 FMO4P31512 558 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CCNFP41002 786 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CASRP41180 1078 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 PTGIRP43119 386 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 BDKRB1P46663 353 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ADARP55265 1226 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 KLRB1Q12918 225 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 DHX34Q14147 1143 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 NCF4Q15080 339 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ZNF385CQ66K41 422 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CPZQ66K79 652 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 TLDC1Q6P9B6 456 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CNSTQ6PJW8 725 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ASB18Q6ZVZ8 466 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 TAX1BP1Q86VP1 789 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CAND1Q86VP6 1230 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CILP2Q8IUL8 1156 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 REXO1L1PQ8IX06 675 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 FAM20CQ8IXL6 584 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 SLC35F6Q8N357 371 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 RAB42Q8N4Z0 105 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 C2orf73Q8N5S3 287 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ZNF655Q8N720 491 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 LMNTD1Q8N9Z9 388 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 MCUQ8NE86 351 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 PROKR1Q8TCW9 393 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 MAGEC3Q8TD91 643 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ACTRT1Q8TDG2 376 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ADAMTS17Q8TE56 1095 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 GRK7Q8WTQ7 553 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 COG1Q8WTW3 980 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 LPGAT1Q92604 370 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 PCSK5Q92824 1860 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 RAD51AP1Q96B01 352 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ZNF669Q96BR6 464 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 SERPINB12Q96P63 405 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 OSBPL9Q96SU4 736 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 C17orf62Q9BQA9 187 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 DHRS4Q9BTZ2 278 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 TRIM55Q9BYV6 548 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 SPRTNQ9H040 489 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ING2Q9H160 280 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 XAB2Q9HCS7 855 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 TXLNGQ9NUQ3 528 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 INTS7Q9NVH2 962 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 INTS10Q9NVR2 710 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 IRAK4Q9NWZ3 460 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 IL1RAPL1Q9NZN1 696 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 GPN3Q9UHW5 284 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 SRPK3Q9UPE1 567 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 PLCL2Q9UPR0 1127 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 RUVBL2Q9Y230 463 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 VPS9D1Q9Y2B5 631 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 PADI2Q9Y2J8 665 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms