RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ITGAXP20702 1163 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 GRB7Q14451 532 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 PLEKHN1Q494U1 663 aaPredicted RBP17.85■□□□□ 0.45
PRKCB-209ENST00000498058 NUP210LQ5VU65 1888 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 MRPL14Q6P1L8 145 aaKnown RBP17.85■□□□□ 0.45
PRKCB-209ENST00000498058 RAB43Q86YS6 212 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 LINC01555Q8NAE3 123 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.85■□□□□ 0.452e-10■■■■■ 82.5
PRKCB-209ENST00000498058 DHRS4Q9BTZ2 278 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 OR6C2Q9NZP2 312 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 PTRH2Q9Y3E5 179 aaKnown RBP17.85■□□□□ 0.45
PRKCB-209ENST00000498058 PCM1Q15154 2024 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 IQCF5A8MTL0 148 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 ISM1B1AKI9 464 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 PSMD3O43242 534 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 PKLRP30613 574 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 CKAP4Q07065 602 aaKnown RBP17.84■□□□□ 0.45
PRKCB-209ENST00000498058 SSPNQ14714 243 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 OASLQ15646 514 aaKnown RBP17.84■□□□□ 0.45
PRKCB-209ENST00000498058 EIF2S3LQ2VIR3 472 aaKnown RBP17.84■□□□□ 0.45
PRKCB-209ENST00000498058 TSTD2Q5T7W7 516 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 PPP1R32Q7Z5V6 425 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 LDB1Q86U70 411 aaPredicted RBP17.84■□□□□ 0.45
PRKCB-209ENST00000498058 HOOK3Q86VS8 718 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 C2orf73Q8N5S3 287 aaPredicted RBP17.84■□□□□ 0.45
PRKCB-209ENST00000498058 N4BP2L2Q92802 583 aaPredicted RBP17.84■□□□□ 0.45
PRKCB-209ENST00000498058 INPP5DQ92835 1189 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 PNPLA2Q96AD5 504 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 SGSM3Q96HU1 749 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 CAPZA3Q96KX2 299 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 IL17FQ96PD4 163 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 AP1M1Q9BXS5 423 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 ZNF552Q9H707 407 aaPredicted RBP17.84■□□□□ 0.45
PRKCB-209ENST00000498058 ZBTB20Q9HC78 741 aaPredicted RBP17.84■□□□□ 0.45
PRKCB-209ENST00000498058 POLG2Q9UHN1 485 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 CDC23Q9UJX2 597 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 AP1M2Q9Y6Q5 423 aa17.84■□□□□ 0.45
PRKCB-209ENST00000498058 ZSCAN9O15535 394 aaPredicted RBP17.83■□□□□ 0.44
PRKCB-209ENST00000498058 GPC4O75487 556 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 SUN1O94901 812 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 OR56A5P0C7T3 313 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 MAGP20916 626 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 RRADP55042 308 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 DCDP81605 110 aaKnown RBP17.83■□□□□ 0.44
PRKCB-209ENST00000498058 ACVR1Q04771 509 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 CDH17Q12864 832 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 KYNUQ16719 465 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 WHAMMP3Q1A5X7 153 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 SLC5A12Q1EHB4 618 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 C4orf17Q53FE4 359 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 DCAF10Q5QP82 559 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 LINC00523Q86TU6 105 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 SLC22A15Q8IZD6 547 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 OR2Y1Q8NGV0 311 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 PROKR1Q8TCW9 393 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 MS4A14Q96JA4 679 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 SLAMF7Q9NQ25 335 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 PLEKHB1Q9UF11 243 aaPredicted RBP17.83■□□□□ 0.44
PRKCB-209ENST00000498058 PADI2Q9Y2J8 665 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 TEX15Q9BXT5 2789 aa17.83■□□□□ 0.44
PRKCB-209ENST00000498058 QSOX1O00391 747 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 LIASO43766 372 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 FOLR3P41439 243 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 KIR2DS3Q14952 304 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 NKAIN1Q4KMZ8 207 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 SYTL3Q4VX76 610 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 VWA5B1Q5TIE3 1220 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 AFTPHQ6ULP2 937 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 TAX1BP1Q86VP1 789 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 CREG2Q8IUH2 290 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 LURAP1LQ8IV03 231 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 KRT222Q8N1A0 295 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 DNAAF3Q8N9W5 541 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 SSC4DQ8WTU2 575 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 SNRNP40Q96DI7 357 aaKnown RBP17.82■□□□□ 0.44
PRKCB-209ENST00000498058 RANBP9Q96S59 729 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 CASS4Q9NQ75 786 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 P4HTMQ9NXG6 502 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 EURLQ9NYK6 297 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 MARCH4Q9P2E8 410 aaPredicted RBP17.82■□□□□ 0.44
PRKCB-209ENST00000498058 IFT80Q9P2H3 777 aaPredicted RBP17.82■□□□□ 0.44
PRKCB-209ENST00000498058 RIMKLBQ9ULI2 386 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 PLCL2Q9UPR0 1127 aa17.82■□□□□ 0.44
PRKCB-209ENST00000498058 HEATR9A2RTY3 570 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 KRT87PA6NCN2 255 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 ADRA1DP25100 572 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 HSPA14Q0VDF9 509 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 MYBPC3Q14896 1274 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 CRB2Q5IJ48 1285 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 FCRL6Q6DN72 434 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 TLDC1Q6P9B6 456 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 HPS6Q86YV9 775 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 GALNT16Q8N428 558 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 DTWD1Q8N5C7 304 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 MNS1Q8NEH6 495 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 OR4L1Q8NH43 312 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 CFAP61Q8NHU2 1237 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.81■□□□□ 0.44
PRKCB-209ENST00000498058 C1orf54Q8WWF1 131 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 ASF1BQ9NVP2 202 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms