RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 NUP85Q9BW27 656 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 UCK2Q9BZX2 261 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 DEF6Q9H4E7 631 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 SOX17Q9H6I2 414 aaPredicted RBP9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 KIR3DX1Q9H7L2 352 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 NOCTQ9UK39 431 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 NXT1Q9UKK6 140 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 NPIPA1Q9UND3 350 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 FOXN3O00409 490 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 ADAM10O14672 748 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 TTI1O43156 1089 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 CCP110O43303 1012 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 WISP2O76076 250 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 ALBP02768 609 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 ERCC2P18074 760 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 NDUFS1P28331 727 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 PRDX3P30048 256 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 KRT33BQ14525 404 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 EXOC3L4Q17RC7 722 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 VWA3BQ502W6 1294 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZNF766Q5HY98 468 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 MARC1Q5VT66 337 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 SHEQ5VZ18 495 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 TLDC1Q6P9B6 456 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 C16orf47Q6ZP98 133 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 SHISA6Q6ZSJ9 500 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 RFX8Q6ZV50 586 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 CDC20BQ86Y33 519 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 FAM71AQ8IYT1 594 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 TRAM1L1Q8N609 369 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 CPSF7Q8N684 471 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 C19orf47Q8N9M1 422 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 OR4E2Q8NGC2 313 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 GDAP1Q8TB36 358 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZNF837Q96EG3 531 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 C12orf66Q96MD2 445 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 TTC25Q96NG3 672 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 LYSMD1Q96S90 227 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 C11orf70Q9BRQ4 267 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 TDRD1Q9BXT4 1180 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 PITPNM3Q9BZ71 974 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 SPRTNQ9H040 489 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 SRMSQ9H3Y6 488 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 RASSF1Q9NS23 344 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 INTS7Q9NVH2 962 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 DTLQ9NZJ0 730 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 DNAJC12Q9UKB3 198 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 RCOR1Q9UKL0 485 aa9.2□□□□□ -0.94
SMARCAL1-213ENST00000496037 SEC16AO15027 2179 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 INTS1Q8N201 2190 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 NSG1A0A0A6YYJ2 146 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 A0A1B0GTH6 734 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 EIF3CLB5ME19 914 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 KLK8O60259 260 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 ATE1O95260 518 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 SLC4A1P02730 911 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 PRR35P0CG20 571 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 PVRP15151 417 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 ALAS2P22557 587 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 LORP23490 312 aaPredicted RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 NSG1P42857 185 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 DCDC1P59894 354 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 RPL26P61254 145 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 NKX6-1P78426 367 aaPredicted RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 OLIG2Q13516 323 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 PNOCQ13519 176 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 SYCP1Q15431 976 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 NKG7Q16617 165 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 DBN1Q16643 649 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 SLC5A12Q1EHB4 618 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 TFDP3Q5H9I0 405 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 ABHD17BQ5VST6 288 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 TMEM211Q6ICI0 200 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 CNSTQ6PJW8 725 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 OVCH1Q7RTY7 1134 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 ATPAF2Q8N5M1 289 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 BEND7Q8N7W2 519 aaPredicted RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 PPHLN1Q8NEY8 458 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 RND1Q92730 232 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 DLG3Q92796 817 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 DHTKD1Q96HY7 919 aaPredicted RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 GSDMAQ96QA5 445 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 EIF3CQ99613 913 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 ELAC2Q9BQ52 826 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 CRB3Q9BUF7 120 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 SPATA9Q9BWV2 254 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 POLR1EQ9GZS1 481 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 DHX35Q9H5Z1 703 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 NT5MQ9NPB1 228 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 RAD18Q9NS91 495 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 RPL26L1Q9UNX3 145 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 AP4E1Q9UPM8 1137 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 RNF6Q9Y252 685 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 CHKBQ9Y259 395 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 L3MBTL1Q9Y468 752 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 COLEC10Q9Y6Z7 277 aa9.19□□□□□ -0.94
SMARCAL1-213ENST00000496037 TMEM238LA0A1B0GVL6 79 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 A0A1B0GX78 115 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 BICDL2A1A5D9 508 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 GTPBP10A4D1E9 387 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms