RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ANKRD22Q5VYY1 191 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 TRIM73Q86UV7 250 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 CILP2Q8IUL8 1156 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 PROKR1Q8TCW9 393 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 DENND1AQ8TEH3 1009 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 SERPINB12Q96P63 405 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 RUFY1Q96T51 708 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 TCFL5Q9UL49 500 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 SNX12Q9UMY4 172 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 SRPK3Q9UPE1 567 aa23.35■■□□□ 1.33
HLA-C-209ENST00000495835 SNRNP200O75643 2136 aaKnown RBP23.35■■□□□ 1.33
HLA-C-209ENST00000495835 TMEM63AO94886 807 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 WISP1O95388 367 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 C1orf105O95561 183 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 FMO4P31512 558 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 MAGEA3P43357 314 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 DHX34Q14147 1143 aaKnown RBP23.34■■□□□ 1.33
HLA-C-209ENST00000495835 ANKRD20A4Q4UJ75 823 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 ZNF385CQ66K41 422 aaPredicted RBP23.34■■□□□ 1.33
HLA-C-209ENST00000495835 ENDOVQ8N8Q3 282 aaKnown RBP23.34■■□□□ 1.33
HLA-C-209ENST00000495835 ADAMTS17Q8TE56 1095 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 ZUFSPQ96AP4 578 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 ENAMQ9NRM1 1142 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 KLHL42Q9P2K6 505 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 SNX7Q9UNH6 387 aa23.34■■□□□ 1.33
HLA-C-209ENST00000495835 TARM1B6A8C7 271 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 C9J4A7 227 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 MATN4O95460 622 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 PKMP14618 531 aaKnown RBP23.33■■□□□ 1.33
HLA-C-209ENST00000495835 CSRP3P50461 194 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 RPS18P62269 152 aaKnown RBP23.33■■□□□ 1.33
HLA-C-209ENST00000495835 LCN10Q6JVE6 187 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 CENPUQ71F23 418 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 PPIL6Q8IXY8 311 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 NAT8LQ8N9F0 302 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 COG1Q8WTW3 980 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 PADI2Q9Y2J8 665 aa23.33■■□□□ 1.33
HLA-C-209ENST00000495835 GOLGA8KD6RF30 607 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 GOLGA8TH3BQL2 631 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 ZSCAN9O15535 394 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-209ENST00000495835 PRICKLE3O43900 615 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-209ENST00000495835 USP1O94782 785 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 CHRM3P20309 590 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 NFKB2Q00653 900 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 THOC5Q13769 683 aaKnown RBP23.32■■□□□ 1.32
HLA-C-209ENST00000495835 NCF4Q15080 339 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 ZC3H12BQ5HYM0 836 aaKnown RBP23.32■■□□□ 1.32
HLA-C-209ENST00000495835 FAM198BQ6UWH4 519 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 LMNTD1Q8N9Z9 388 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 CALML6Q8TD86 181 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 SKA2Q8WVK7 121 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-209ENST00000495835 SPRTNQ9H040 489 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-209ENST00000495835 ZNF71Q9NQZ8 489 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-209ENST00000495835 SPATA7Q9P0W8 599 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-209ENST00000495835 TLK1Q9UKI8 766 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 CRYL1Q9Y2S2 319 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 KLK4Q9Y5K2 254 aa23.32■■□□□ 1.32
HLA-C-209ENST00000495835 ZCWPW2A0A1B0GU75 182 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 E5RI56 91 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 TCP1P17987 556 aaKnown RBP23.31■■□□□ 1.32
HLA-C-209ENST00000495835 MAGP20916 626 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 CASRP41180 1078 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 TERF1P54274 439 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 KCNC4Q03721 635 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 IL10RAQ13651 578 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 SF1Q15637 639 aaKnown RBP23.31■■□□□ 1.32
HLA-C-209ENST00000495835 NEK10Q6ZWH5 1172 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 PTRH1Q86Y79 214 aaKnown RBP23.31■■□□□ 1.32
HLA-C-209ENST00000495835 DLG3Q92796 817 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 SLCO2A1Q92959 643 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 ZNF669Q96BR6 464 aaPredicted RBP23.31■■□□□ 1.32
HLA-C-209ENST00000495835 SIGLEC10Q96LC7 697 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 IP6K3Q96PC2 410 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 EURLQ9NYK6 297 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 NFS1Q9Y697 457 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 COMMD10Q9Y6G5 202 aa23.31■■□□□ 1.32
HLA-C-209ENST00000495835 NIPSNAP2O75323 286 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 ARSFP54793 590 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 DCDP81605 110 aaKnown RBP23.3■■□□□ 1.32
HLA-C-209ENST00000495835 KLRB1Q12918 225 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 NAA25Q14CX7 972 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 LONRF1Q17RB8 773 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 PTCHD3Q3KNS1 767 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 TTLL9Q3SXZ7 439 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 TCTE1Q5JU00 501 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 YOD1Q5VVQ6 348 aaPredicted RBP23.3■■□□□ 1.32
HLA-C-209ENST00000495835 PCGF5Q86SE9 256 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 ZBTB2Q8N680 514 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 IL17FQ96PD4 163 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 GBP5Q96PP8 586 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 NDC1Q9BTX1 674 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 TXLNGQ9NUQ3 528 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 TP53TG5Q9Y2B4 290 aa23.3■■□□□ 1.32
HLA-C-209ENST00000495835 PCDHGA9Q9Y5G4 932 aaKnown RBP23.3■■□□□ 1.32
HLA-C-209ENST00000495835 CTAGE9A4FU28 777 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 HCRTR1O43613 425 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 PPP1R7Q15435 360 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 CYP2A13Q16696 494 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 DEFB110Q30KQ9 67 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms