RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 GLRBP48167 497 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 ITIH4Q14624 930 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 HIF1AQ16665 826 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 MRPL14Q6P1L8 145 aaKnown RBP12.16□□□□□ -0.46
SKA1-205ENST00000494518 TLDC1Q6P9B6 456 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 RAD9BQ6WBX8 426 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 TTLL10Q6ZVT0 673 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 MAMDC2Q7Z304 686 aaPredicted RBP12.16□□□□□ -0.46
SKA1-205ENST00000494518 CUZD1Q86UP6 607 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 VRK3Q8IV63 474 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 DNAJC22Q8N4W6 341 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 DTWD1Q8N5C7 304 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 PROKR1Q8TCW9 393 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 ATG4AQ8WYN0 398 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 HDAC10Q969S8 669 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 PTERQ96BW5 349 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 IP6K3Q96PC2 410 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 C19orf43Q9BQ61 176 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 AP1M1Q9BXS5 423 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 EURLQ9NYK6 297 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 OR6C2Q9NZP2 312 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 C5AR2Q9P296 337 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 POLG2Q9UHN1 485 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 FBXL4Q9UKA2 621 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 PLCL2Q9UPR0 1127 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 TEP1Q99973 2627 aaKnown RBP12.15□□□□□ -0.46
SKA1-205ENST00000494518 A0A0U1RQJ8 604 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 GOLGA6L9A6NEM1 432 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 ANKUB1A6NFN9 424 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 MROH6A6NGR9 719 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 IQCF5A8MTL0 148 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 FTCDO95954 541 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 GOT2P00505 430 aaKnown RBP12.15□□□□□ -0.46
SKA1-205ENST00000494518 LDLRP01130 860 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 GSTM1P09488 218 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 OR56A5P0C7T3 313 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 ITGAXP20702 1163 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 PKLRP30613 574 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 GRIA3P42263 894 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 GSTM4Q03013 218 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 HSPA14Q0VDF9 509 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 SEMA3AQ14563 771 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 SLC5A12Q1EHB4 618 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 SKOR2Q2VWA4 1001 aaPredicted RBP12.15□□□□□ -0.46
SKA1-205ENST00000494518 P3H1Q32P28 736 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 PACS1Q6VY07 963 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 PRUNE1Q86TP1 453 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 LDB1Q86U70 411 aaPredicted RBP12.15□□□□□ -0.46
SKA1-205ENST00000494518 ZADH2Q8N4Q0 377 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 LRRC57Q8N9N7 239 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 DNAAF3Q8N9W5 541 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 LINC01555Q8NAE3 123 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 OR13J1Q8NGT2 312 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 KRTAP3-2Q9BYR7 98 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 SOX17Q9H6I2 414 aaPredicted RBP12.15□□□□□ -0.46
SKA1-205ENST00000494518 SLC6A20Q9NP91 592 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.15□□□□□ -0.46
SKA1-205ENST00000494518 CDC23Q9UJX2 597 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 AMFRQ9UKV5 643 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 SRPK3Q9UPE1 567 aa12.15□□□□□ -0.46
SKA1-205ENST00000494518 COPG1Q9Y678 874 aaKnown RBP12.15□□□□□ -0.46
SKA1-205ENST00000494518 PCNX1Q96RV3 2341 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 KRT87PA6NCN2 255 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 QSOX1O00391 747 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 IPO7O95373 1038 aaKnown RBP12.14□□□□□ -0.47
SKA1-205ENST00000494518 VARSP26640 1264 aaKnown RBP12.14□□□□□ -0.47
SKA1-205ENST00000494518 CCR7P32248 378 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 DCTP40126 519 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 GRIA1P42261 906 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 RAB28P51157 221 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 ELOAQ14241 798 aaKnown RBP12.14□□□□□ -0.47
SKA1-205ENST00000494518 KIR2DS3Q14952 304 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 PPP1R21Q6ZMI0 780 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 COX15Q7KZN9 410 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 PEX26Q7Z412 305 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 KIAA1328Q86T90 577 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 MCATQ8IVS2 390 aaKnown RBP12.14□□□□□ -0.47
SKA1-205ENST00000494518 KRT222Q8N1A0 295 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 OR6P1Q8NGX9 317 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 C5orf34Q96MH7 638 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 ZNF778Q96MU6 729 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 MESP1Q9BRJ9 268 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 ATP13A2Q9NQ11 1180 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 TSR3Q9UJK0 312 aaKnown RBP12.14□□□□□ -0.47
SKA1-205ENST00000494518 SLC5A6Q9Y289 635 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 PCDHGA10Q9Y5H3 936 aa12.14□□□□□ -0.47
SKA1-205ENST00000494518 AGPSO00116 658 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 IGHEP01854 428 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 BDKRB1P46663 353 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 OR1D4P47884 311 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 KLF1Q13351 362 aaPredicted RBP12.13□□□□□ -0.47
SKA1-205ENST00000494518 FCRL6Q6DN72 434 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 AFTPHQ6ULP2 937 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 Q6ZS92 163 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 ZNF534Q76KX8 674 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 PARP9Q8IXQ6 854 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 PRSS58Q8IYP2 241 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms