RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 TMEM216Q9P0N5 145 aa11.21□□□□□ -0.61
LSM2-214ENST00000493387 XPR1Q9UBH6 696 aa11.21□□□□□ -0.61
LSM2-214ENST00000493387 IKZF3Q9UKT9 509 aa11.21□□□□□ -0.61
LSM2-214ENST00000493387 CDV3Q9UKY7 258 aaKnown RBP11.21□□□□□ -0.61
LSM2-214ENST00000493387 PCDHGA1Q9Y5H4 931 aa11.21□□□□□ -0.61
LSM2-214ENST00000493387 PRAMEF33A0A0G2JMD5 474 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 DUX1O43812 170 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 TYROBPO43914 113 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 PLIN3O60664 434 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 IPO13O94829 963 aaKnown RBP11.2□□□□□ -0.62
LSM2-214ENST00000493387 ZWINTO95229 277 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 FKBP9O95302 570 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 GUCA1CO95843 209 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 SLC16A8O95907 504 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 PROS1P07225 676 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 GFAPP14136 432 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 KCNC1P48547 511 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 SLC18A1P54219 525 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 KIR2DS3Q14952 304 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 TRIP6Q15654 476 aaKnown RBP11.2□□□□□ -0.62
LSM2-214ENST00000493387 METTL2BQ6P1Q9 378 aaKnown RBP11.2□□□□□ -0.62
LSM2-214ENST00000493387 AGTRAPQ6RW13 159 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 CDHR3Q6ZTQ4 885 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 SPRED1Q7Z699 444 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 RAB44Q7Z6P3 723 aaPredicted RBP11.2□□□□□ -0.62
LSM2-214ENST00000493387 SLC22A9Q8IVM8 553 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 SYTL1Q8IYJ3 562 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 CCDC63Q8NA47 563 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 PDPRQ8NCN5 879 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 ARL8AQ96BM9 186 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 RHBDF1Q96CC6 855 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 TBC1D10AQ9BXI6 508 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 RAB33BQ9H082 229 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 KCNK9Q9NPC2 374 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 MED4Q9NPJ6 270 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 UTP6Q9NYH9 597 aaKnown RBP11.2□□□□□ -0.62
LSM2-214ENST00000493387 STOX2Q9P2F5 926 aaPredicted RBP11.2□□□□□ -0.62
LSM2-214ENST00000493387 EPHA6Q9UF33 1036 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 ICKQ9UPZ9 632 aa11.2□□□□□ -0.62
LSM2-214ENST00000493387 TNPO3Q9Y5L0 923 aaKnown RBP11.2□□□□□ -0.62
LSM2-214ENST00000493387 ZFHX2Q9C0A1 2572 aaPredicted RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 IGHV1OR21-1A0A087WYE8 117 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 OR6C74A6NCV1 312 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 OR5K3A6NET4 321 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 PCNX2A6NKB5 2137 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 C2orf74A8MZ97 194 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 TARM1B6A8C7 271 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 STX16-NPEPL1H3BU86 382 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 UBXN8O00124 270 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 STX16O14662 325 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 TM4SF5O14894 197 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 B4GAT1O43505 415 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 KLK8O60259 260 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 SPAG7O75391 227 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 CCNDBP1O95273 360 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 TOP3BO95985 862 aaKnown RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 PROCP04070 461 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 CHRM5P08912 532 aaPredicted RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 MYL2P10916 166 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 MYF5P13349 255 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 CEACAM1P13688 526 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 ATP5F1P24539 256 aaPredicted RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 IMPA1P29218 277 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 GGT5P36269 586 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 PPM1FP49593 454 aaPredicted RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 ACADVLP49748 655 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 ALDH18A1P54886 795 aaKnown RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 OR1D5P58170 312 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 NAA20P61599 178 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 ASPHQ12797 758 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 NAA25Q14CX7 972 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 CCSMST1Q4G0I0 132 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 PERM1Q5SV97 790 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 CAPN13Q6MZZ7 669 aaPredicted RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 C16orf46Q6P387 395 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 WDR74Q6RFH5 385 aaPredicted RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 ZYG11AQ6WRX3 759 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 ZNF761Q86XN6 746 aaPredicted RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 PLXDC1Q8IUK5 500 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 FBXO39Q8N4B4 442 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 TMEM151AQ8N4L1 468 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 Q8N9G6 341 aaPredicted RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 TCP10LQ8TDR4 215 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 DENND1AQ8TEH3 1009 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 UBTD2Q8WUN7 234 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 ZNF480Q8WV37 535 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 SREK1Q8WXA9 508 aaKnown RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 EXT2Q93063 718 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 ZDHHC12Q96GR4 267 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 IL17FQ96PD4 163 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 CD180Q99467 661 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 MIPEPQ99797 713 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 CCDC3Q9BQI4 270 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 MENTQ9BUN1 341 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 ABCG4Q9H172 646 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 LRRN3Q9H3W5 708 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 XKR8Q9H6D3 395 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 HRASLS2Q9NWW9 162 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 NKIRAS1Q9NYS0 192 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 WWOXQ9NZC7 414 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms