RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 DLG3Q92796 817 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 NACC2Q96BF6 587 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 PIH1D1Q9NWS0 290 aaKnown RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 FEZ2Q9UHY8 353 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 HS3ST3B1Q9Y662 390 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 A0A1B0GX78 115 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 SLC5A10A0PJK1 596 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 OR51F1A6NGY5 319 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 AP2A1O95782 977 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 FTH1P02794 183 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 EDN3P14138 238 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 MCM3P25205 808 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 ELAVL4P26378 380 aaKnown RBP16.29■□□□□ 0.2
TOP3B-217ENST00000489581 NSG1P42857 185 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 GCGRP47871 477 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 ARSFP54793 590 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 CSE1LP55060 971 aaKnown RBP16.29■□□□□ 0.2
TOP3B-217ENST00000489581 COPS2P61201 443 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 POU6F1Q14863 301 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 KIR2DS3Q14952 304 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 NKG7Q16617 165 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 KIRREL2Q6UWL6 708 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 COX15Q7KZN9 410 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 STYXQ8WUJ0 223 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 FKBP10Q96AY3 582 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 LRRC45Q96CN5 670 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 PHF12Q96QT6 1004 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 SPSB2Q99619 263 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 OSBPL8Q9BZF1 889 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 UNKQ9C0B0 810 aaKnown RBP16.29■□□□□ 0.2
TOP3B-217ENST00000489581 SOX17Q9H6I2 414 aaPredicted RBP16.29■□□□□ 0.2
TOP3B-217ENST00000489581 IMPACTQ9P2X3 320 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 ENTPD4Q9Y227 616 aa16.29■□□□□ 0.2
TOP3B-217ENST00000489581 APCP25054 2843 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 QSOX1O00391 747 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 PJA2O43164 708 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 ALBP02768 609 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 PIM1P11309 404 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-217ENST00000489581 POU3F2P20265 443 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-217ENST00000489581 GRIA3P42263 894 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 ITIH4Q14624 930 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 SYTL3Q4VX76 610 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 KCTD11Q693B1 232 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 C11orf63Q6NUN7 778 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 FJX1Q86VR8 437 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 CATSPER1Q8NEC5 780 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 COG1Q8WTW3 980 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 THOC3Q96J01 351 aaKnown RBP16.28■□□□□ 0.2
TOP3B-217ENST00000489581 PPP1R2P1Q96PQ5 205 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 LHPPQ9H008 270 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 EPS8L2Q9H6S3 715 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 CUTCQ9NTM9 273 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 CIDEBQ9UHD4 219 aa16.28■□□□□ 0.2
TOP3B-217ENST00000489581 PRSS44E7EML9 344 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 DSCR3O14972 297 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 KDM1AO60341 852 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 MSNP26038 577 aaKnown RBP16.27■□□□□ 0.2
TOP3B-217ENST00000489581 PKLRP30613 574 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 OR1D4P47884 311 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 NAA30Q147X3 362 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-217ENST00000489581 TLR1Q15399 786 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 RBBP7Q16576 425 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 TUBB8Q3ZCM7 444 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 B3GNTL1Q67FW5 361 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-217ENST00000489581 AADACL2Q6P093 401 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 LINC00696Q6ZRV3 163 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 TAX1BP1Q86VP1 789 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 KLHDC8BQ8IXV7 354 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 DTWD1Q8N5C7 304 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 METTL27Q8N6F8 245 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-217ENST00000489581 LINC01555Q8NAE3 123 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 DENND1AQ8TEH3 1009 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 ALS2CR12Q96Q35 445 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 WDR54Q9H977 334 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 MRM3Q9HC36 420 aaKnown RBP16.27■□□□□ 0.2
TOP3B-217ENST00000489581 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-217ENST00000489581 CTSFQ9UBX1 484 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 EFR3BQ9Y2G0 817 aa16.27■□□□□ 0.2
TOP3B-217ENST00000489581 C2CD3Q4AC94 2353 aa16.27■□□□□ 0.19
TOP3B-217ENST00000489581 F8P00451 2351 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 OR1I1O60431 355 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 KLHL18O94889 574 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 METTL18O95568 372 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 ONECUT2O95948 504 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 STSP08842 583 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 OR56A5P0C7T3 313 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 FOXN2P32314 431 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 RAB28P51157 221 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 PLOD1Q02809 727 aaPredicted RBP16.26■□□□□ 0.19
TOP3B-217ENST00000489581 Q0VFX4 171 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 FCRL6Q6DN72 434 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 FIGLAQ6QHK4 219 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 FAM180AQ6UWF9 173 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 PACS1Q6VY07 963 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 ARHGEF18Q6ZSZ5 1173 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 OR11G2Q8NGC1 345 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 CFAP61Q8NHU2 1237 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 MOCOSQ96EN8 888 aa16.26■□□□□ 0.19
TOP3B-217ENST00000489581 IL17FQ96PD4 163 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms