RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CD300CQ08708 224 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 ZNF415Q09FC8 603 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 SEL1L3Q68CR1 1132 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 HAUS3Q68CZ6 603 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 KIF6Q6ZMV9 814 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 TMPRSS11FQ6ZWK6 438 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 KRTAP11-1Q8IUC1 163 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 MOSPD2Q8NHP6 518 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 ARSGQ96EG1 525 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 AGAP4Q96P64 663 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 GAL3ST4Q96RP7 486 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 RTN4RQ9BZR6 473 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 FTOQ9C0B1 505 aaKnown RBP eCLIP3.33□□□□□ -1.88
SMC4-219ENST00000487747 HRH4Q9H3N8 390 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 KCNK15Q9H427 330 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 AASSQ9UDR5 926 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 PLAGL1Q9UM63 463 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 GTF2A1LQ9UNN4 478 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 CSNK1G3Q9Y6M4 447 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 PCDH11YQ9BZA8 1340 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 FEZF1A0PJY2 475 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 PHOX2AO14813 284 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 DARSP14868 501 aaKnown RBP3.32□□□□□ -1.88
SMC4-219ENST00000487747 BCL3P20749 454 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 TM4SF1P30408 202 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 LBX1P52954 281 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 IRF3Q14653 427 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 TBC1D1Q86TI0 1168 aaPredicted RBP3.32□□□□□ -1.88
SMC4-219ENST00000487747 LDB1Q86U70 411 aaPredicted RBP3.32□□□□□ -1.88
SMC4-219ENST00000487747 ABHD12Q8N2K0 398 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 AFAP1Q8N556 730 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 MAPK15Q8TD08 544 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 SCFD2Q8WU76 684 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 CHPT1Q8WUD6 406 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 GATAD1Q8WUU5 269 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 UCMAQ8WVF2 138 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 TBC1D17Q9HA65 648 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 ABCB10Q9NRK6 738 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 SERINC1Q9NRX5 453 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 ZNF510Q9Y2H8 683 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 TDRD9Q8NDG6 1382 aaKnown RBP3.32□□□□□ -1.88
SMC4-219ENST00000487747 ARID2Q68CP9 1835 aa3.32□□□□□ -1.88
SMC4-219ENST00000487747 ASB14A6NK59 587 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 SHISA7A6NL88 538 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 ENO4A6NNW6 628 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 CDRT15L2A8MXV6 281 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 B4E171 279 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 RTL8CO15255 209 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 GLRA3O75311 464 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 MED24O75448 989 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 CDK2AP2O75956 126 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 HPRP00739 348 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 IGHEP01854 428 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 VTNP04004 478 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 CDH3P22223 829 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 IL4RP24394 825 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 HADHAP40939 763 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 TSPAN7P41732 249 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 MPP1Q00013 466 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 CDK3Q00526 305 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 GUCY2DQ02846 1103 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 CXCL9Q07325 125 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 KRT32Q14532 448 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 CRYMQ14894 314 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 LYSMD4Q5XG99 296 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 HAUS6Q7Z4H7 955 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 NAXEQ8NCW5 288 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 PAPD5Q8NDF8 572 aaKnown RBP3.31□□□□□ -1.88
SMC4-219ENST00000487747 APOBEC4Q8WW27 367 aaKnown RBP3.31□□□□□ -1.88
SMC4-219ENST00000487747 PPM1MQ96MI6 270 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 RAD9AQ99638 391 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 OLFM1Q99784 485 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 TDRD1Q9BXT4 1180 aaKnown RBP3.31□□□□□ -1.88
SMC4-219ENST00000487747 MED20Q9H944 212 aa3.31□□□□□ -1.88
SMC4-219ENST00000487747 SEPT11Q9NVA2 429 aaKnown RBP3.31□□□□□ -1.88
SMC4-219ENST00000487747 ANKUB1A6NFN9 424 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 SLC2A2P11168 524 aaPredicted RBP3.3□□□□□ -1.88
SMC4-219ENST00000487747 JAK1P23458 1154 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 PTPN3P26045 913 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 ARL3P36405 182 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 C15orf32Q32M92 178 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 CES4AQ5XG92 561 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 TEX38Q6PEX7 206 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 FBXO39Q8N4B4 442 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 LRRC15Q8TF66 581 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 SLC45A3Q96JT2 553 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 PPANQ9NQ55 473 aaKnown RBP3.3□□□□□ -1.88
SMC4-219ENST00000487747 NDE1Q9NXR1 346 aa3.3□□□□□ -1.88
SMC4-219ENST00000487747 LRRC72A6NJI9 287 aa3.29□□□□□ -1.88
SMC4-219ENST00000487747 PAPSS1O43252 624 aaPredicted RBP3.29□□□□□ -1.88
SMC4-219ENST00000487747 CD4P01730 458 aa3.29□□□□□ -1.88
SMC4-219ENST00000487747 SMIM18P0DKX4 95 aa3.29□□□□□ -1.88
SMC4-219ENST00000487747 CHMP24386 653 aa3.29□□□□□ -1.88
SMC4-219ENST00000487747 ACSL1P33121 698 aa3.29□□□□□ -1.88
SMC4-219ENST00000487747 ETV5P41161 510 aa3.29□□□□□ -1.88
SMC4-219ENST00000487747 MTHFRP42898 656 aa3.29□□□□□ -1.88
SMC4-219ENST00000487747 MFAP4P55083 255 aa3.29□□□□□ -1.88
SMC4-219ENST00000487747 XGP55808 180 aa3.29□□□□□ -1.88
SMC4-219ENST00000487747 SETQ01105 290 aaPredicted RBP3.29□□□□□ -1.88
SMC4-219ENST00000487747 LMOD3Q0VAK6 560 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms