RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CDH13P55290 713 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 IRX1P78414 480 aaPredicted RBP3.65□□□□□ -1.83
LINC00888-204ENST00000487386 CDR2Q01850 454 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 CTU2Q2VPK5 515 aaKnown RBP3.65□□□□□ -1.83
LINC00888-204ENST00000487386 ITPRIPL2Q3MIP1 535 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 CBWD6Q4V339 395 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 CBWD3Q5JTY5 395 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 ARHGEF16Q5VV41 709 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 PSRC1Q6PGN9 363 aaPredicted RBP3.65□□□□□ -1.83
LINC00888-204ENST00000487386 BHLHB9Q6PI77 547 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 TMEM173Q86WV6 379 aaPredicted RBP3.65□□□□□ -1.83
LINC00888-204ENST00000487386 TMEM139Q8IV31 216 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 ZNF595Q8IYB9 648 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 MARVELD2Q8N4S9 558 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 MRGPRDQ8TDS7 321 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 DHX58Q96C10 678 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 SPACA9Q96E40 222 aaPredicted RBP3.65□□□□□ -1.83
LINC00888-204ENST00000487386 NSL1Q96IY1 281 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 ZNF599Q96NL3 588 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 OPRPNQ99935 248 aaPredicted RBP3.65□□□□□ -1.83
LINC00888-204ENST00000487386 MXD3Q9BW11 206 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 WNT5BQ9H1J7 359 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 SERINC1Q9NRX5 453 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 ZDHHC18Q9NUE0 388 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 MRPL15Q9P015 296 aaKnown RBP3.65□□□□□ -1.83
LINC00888-204ENST00000487386 SNX8Q9Y5X2 465 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 DNMT1P26358 1616 aaKnown RBP3.65□□□□□ -1.83
LINC00888-204ENST00000487386 CAMSAP2Q08AD1 1489 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 PCDH11YQ9BZA8 1340 aa3.65□□□□□ -1.83
LINC00888-204ENST00000487386 TROQ12816 1431 aaPredicted RBP3.64□□□□□ -1.83
LINC00888-204ENST00000487386 MYOM3Q5VTT5 1437 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 FGD6Q6ZV73 1430 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 IGKV3D-15A0A087WSY6 115 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 A8MV72 311 aaPredicted RBP3.64□□□□□ -1.83
LINC00888-204ENST00000487386 AHCYL1O43865 530 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 HMBSP08397 361 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 MAGEA11P43364 429 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 NKX2-1P43699 371 aaPredicted RBP3.64□□□□□ -1.83
LINC00888-204ENST00000487386 PDX1P52945 283 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 MAT1AQ00266 395 aaKnown RBP3.64□□□□□ -1.83
LINC00888-204ENST00000487386 TAF13Q15543 124 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 SPDYCQ5MJ68 293 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 CFAP161Q6P656 301 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 FAM198BQ6UWH4 519 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 DNAAF5Q86Y56 855 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 SYT2Q8N9I0 419 aaPredicted RBP3.64□□□□□ -1.83
LINC00888-204ENST00000487386 ZNF485Q8NCK3 441 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 OR4C3Q8NH37 302 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 ZNF653Q96CK0 615 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 POM121L2Q96KW2 1035 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 LINC00479Q96M42 142 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 S1PR5Q9H228 398 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 TBC1D17Q9HA65 648 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 Q9N2K0 584 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 RNF186Q9NXI6 227 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 TAB2Q9NYJ8 693 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 ABCC1P33527 1531 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 ARHGAP5Q13017 1502 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 SYCP2Q9BX26 1530 aa3.64□□□□□ -1.83
LINC00888-204ENST00000487386 SAMD9LQ8IVG5 1584 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 ABCA9Q8IUA7 1624 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 PTPRGP23470 1445 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 UACAQ9BZF9 1416 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 RRBP1Q9P2E9 1410 aaKnown RBP3.63□□□□□ -1.83
LINC00888-204ENST00000487386 UHRF1BP1LA0JNW5 1464 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 WDR7Q9Y4E6 1490 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 KLF11O14901 512 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 ARHGEF9O43307 516 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 CDC123O75794 336 aaPredicted RBP3.63□□□□□ -1.83
LINC00888-204ENST00000487386 DFFBO76075 338 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 IGHV4-31P0DP07 118 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 NR2F1P10589 423 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 CLK1P49759 484 aaKnown RBP3.63□□□□□ -1.83
LINC00888-204ENST00000487386 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 HERV-K104P61576 105 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 HNRNPKP61978 463 aaKnown RBP eCLIP3.63□□□□□ -1.83
LINC00888-204ENST00000487386 PHLDA2Q53GA4 152 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 KLHL26Q53HC5 615 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 GARNL3Q5VVW2 1013 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 PWWP2BQ6NUJ5 590 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 TMPRSS11BQ86T26 416 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 NUDT13Q86X67 352 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 DCLK2Q8N568 766 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 APPL2Q8NEU8 664 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 CFAP61Q8NHU2 1237 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 PHLDA1Q8WV24 401 aaPredicted RBP3.63□□□□□ -1.83
LINC00888-204ENST00000487386 DYRK2Q92630 601 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 GCNAQ96QF7 691 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 ABHD1Q96SE0 405 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 ATP13A3Q9H7F0 1226 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 FGF21Q9NSA1 209 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 PLCXD1Q9NUJ7 323 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 KLHL8Q9P2G9 620 aaPredicted RBP3.63□□□□□ -1.83
LINC00888-204ENST00000487386 TRIM17Q9Y577 477 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 PRSS21Q9Y6M0 314 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 RNF215Q9Y6U7 377 aa3.63□□□□□ -1.83
LINC00888-204ENST00000487386 TCOF1Q13428 1488 aaKnown RBP3.62□□□□□ -1.83
LINC00888-204ENST00000487386 MAPKBP1O60336 1514 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms