RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 SCAMP3O14828 347 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 FFAR2O15552 330 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 PSIP1O75475 530 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 ITGB1P05556 798 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 FYNP06241 537 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 GSTM1P09488 218 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 PRKACBP22694 351 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 POLR2IP36954 125 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 GSTM5P46439 218 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 GPR15P49685 360 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CLCNKBP51801 687 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 RAB25P57735 213 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 RPP38P78345 283 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 HSPA14Q0VDF9 509 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 BOP1Q14137 746 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 MFSD10Q14728 455 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 TSTQ16762 297 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 PARP15Q460N3 678 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 PRSS48Q7RTY5 328 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 MON1AQ86VX9 555 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 RNFT2Q96EX2 444 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 BEX2Q9BXY8 128 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 TRIT1Q9H3H1 467 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 POPDC3Q9HBV1 291 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 WDR6Q9NNW5 1121 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 TIGARQ9NQ88 270 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 ZNF624Q9P2J8 865 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 PCDHGB6Q9Y5F9 930 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 SESN1Q9Y6P5 492 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 SYNDIG1LA6NDD5 238 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CLDN9O95484 217 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 PRPS2P11908 318 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 GADD45AP24522 165 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 RORCP51449 518 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 SMARCB1Q12824 385 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 COX10Q12887 443 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CCDC28AQ8IWP9 274 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 OR52B6Q8NGF0 335 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 C9orf43Q8TAL5 461 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 ZNF675Q8TD23 568 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 SLC22A17Q8WUG5 538 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 GTPBP3Q969Y2 492 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 OTUB1Q96FW1 271 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 FOPNLQ96NB1 174 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 ZNF382Q96SR6 550 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 MYOCQ99972 504 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 SPRTNQ9H040 489 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 ZBTB20Q9HC78 741 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 IL37Q9NZH6 218 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 MAGEB17A8MXT2 336 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CLIC1O00299 241 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 GABARAPO95166 117 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 SLC25A14O95258 325 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 ESR1P03372 595 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CHRM5P08912 532 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 NR2F6P10588 404 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 EFNA1P20827 205 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 FDXRP22570 491 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 YBEYP58557 167 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 IL10RBQ08334 325 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 INAVAQ3KP66 663 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 ADPRMQ3LIE5 342 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 WDR45BQ5MNZ6 344 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 LCN1P1Q5VSP4 162 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 AGAP6Q5VW22 663 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 FAM151BQ6UXP7 276 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CIR1Q86X95 450 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CFAP52Q8N1V2 620 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 LRRC20Q8TCA0 184 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 AGAP4Q96P64 663 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CIPCQ9C0C6 399 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 ABHD16BQ9H3Z7 469 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CRTAC1Q9NQ79 661 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 TREX1Q9NSU2 369 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 ZNF222Q9UK12 451 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 AGO1Q9UL18 857 aaKnown RBP7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 CORO2BQ9UQ03 480 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 PCDHB9Q9Y5E1 797 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 PCDHB14Q9Y5E9 798 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 HSPE1-MOB4S4R3N1 261 aa7.5□□□□□ -1.21
COL6A4P1-202ENST00000487147 A6NL46 340 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 A8MX80 341 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 CXCL11O14625 94 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 EGFRP00533 1210 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 C9P02748 559 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 CSF2P04141 144 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 CYP2A7P20853 494 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 PPIBP23284 216 aaKnown RBP7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 PRDX3P30048 256 aaKnown RBP7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 RECQLP46063 649 aaPredicted RBP7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 CPT1AP50416 773 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 MLLT6P55198 1093 aaPredicted RBP7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 SRP54P61011 504 aaKnown RBP7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 CYP4F8P98187 520 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 CAMK2GQ13555 558 aaPredicted RBP7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 SDE2Q6IQ49 451 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 C16orf62Q7Z3J2 963 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 GOLGA7Q7Z5G4 137 aa7.49□□□□□ -1.21
COL6A4P1-202ENST00000487147 TSPYL5Q86VY4 417 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms